RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 SSRP1Q08945 709 aaKnown RBP30.1■■■□□ 2.41
RHBDD3-203ENST00000413137 SAMD1Q6SPF0 538 aaPredicted RBP30.1■■■□□ 2.41
RHBDD3-203ENST00000413137 AIFM3Q96NN9 605 aa30.1■■■□□ 2.41
RHBDD3-203ENST00000413137 SLC10A3P09131 477 aa30.09■■■□□ 2.41
RHBDD3-203ENST00000413137 GPAT2Q6NUI2 795 aa30.09■■■□□ 2.41
RHBDD3-203ENST00000413137 PROCA1Q8NCQ7 364 aaPredicted RBP30.09■■■□□ 2.41
RHBDD3-203ENST00000413137 ORC3Q9UBD5 711 aaPredicted RBP30.09■■■□□ 2.41
RHBDD3-203ENST00000413137 FEM1BQ9UK73 627 aa30.09■■■□□ 2.41
RHBDD3-203ENST00000413137 PRR12Q9ULL5 1215 aa30.09■■■□□ 2.41
RHBDD3-203ENST00000413137 SMARCA1P28370 1054 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 GTF2A2P52657 109 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 PKN1Q16512 942 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 SYDE2Q5VT97 1194 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 CATSPERGQ6ZRH7 1159 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 BRI3BPQ8WY22 251 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 KIFC2Q96AC6 838 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 PIGSQ96S52 555 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 CREBZFQ9NS37 354 aa30.08■■■□□ 2.41
RHBDD3-203ENST00000413137 PRPF3O43395 683 aaKnown RBP30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 FLOT1O75955 427 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 HHIPL1Q96JK4 782 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 RNF26Q9BY78 433 aaPredicted RBP30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 CCL15-CCL14A0A0B4J2E2 113 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 PLA2G6O60733 806 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 CCL15Q16663 113 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 HOMER1Q86YM7 354 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 CHURC1Q8WUH1 139 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 AGTPBP1Q9UPW5 1226 aa30.07■■■□□ 2.4
RHBDD3-203ENST00000413137 CETPP11597 493 aa30.06■■■□□ 2.4
RHBDD3-203ENST00000413137 HTRA3P83110 453 aa30.06■■■□□ 2.4
RHBDD3-203ENST00000413137 CYP4F22Q6NT55 531 aa30.06■■■□□ 2.4
RHBDD3-203ENST00000413137 FASTKD5Q7L8L6 764 aaKnown RBP30.06■■■□□ 2.4
RHBDD3-203ENST00000413137 MTMR8Q96EF0 704 aa30.06■■■□□ 2.4
RHBDD3-203ENST00000413137 LOC285556D6RIA3 1793 aa30.06■■■□□ 2.4
RHBDD3-203ENST00000413137 STK36Q9NRP7 1315 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L15C9J2P7 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L13C9JLJ4 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L11C9JVI0 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L18D6R9N7 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L22D6RA61 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L17D6RBQ6 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L19D6RCP7 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L20D6RJB6 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 USP17L24Q0WX57 530 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 FAM160B2Q86V87 743 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 TRIM22Q8IYM9 498 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 ZIC5Q96T25 663 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 PTPN18Q99952 460 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 SLF1Q9BQI6 1058 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 GJB4Q9NTQ9 266 aa30.05■■■□□ 2.4
RHBDD3-203ENST00000413137 FOSBP53539 338 aa30.04■■■□□ 2.4
RHBDD3-203ENST00000413137 HMGN5P82970 282 aaKnown RBP30.04■■■□□ 2.4
RHBDD3-203ENST00000413137 GRM1Q13255 1194 aa30.04■■■□□ 2.4
RHBDD3-203ENST00000413137 PAXIP1Q6ZW49 1069 aaPredicted RBP30.04■■■□□ 2.4
RHBDD3-203ENST00000413137 PPP1R9AQ9ULJ8 1098 aa30.04■■■□□ 2.4
RHBDD3-203ENST00000413137 PPP1R11O60927 126 aaPredicted RBP30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 HOXA7P31268 230 aaPredicted RBP30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 PRPF38AQ8NAV1 312 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 CCDC102AQ96A19 550 aa30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 SHISA4Q96DD7 197 aa30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 RRP36Q96EU6 259 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 BTBD19C9JJ37 291 aa30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 AKAP17AQ02040 695 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 POTEEQ6S8J3 1075 aa30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 ATG4CQ96DT6 458 aa30.03■■■□□ 2.4
RHBDD3-203ENST00000413137 RASSF10A6NK89 507 aa30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 DEXIO95424 95 aa30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 TAL1P17542 331 aaPredicted RBP30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 COG2Q14746 738 aa30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 CDC37Q16543 378 aaPredicted RBP30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 QRICH1Q2TAL8 776 aa30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 GPKOWQ92917 476 aaPredicted RBP eCLIP30.02■■■□□ 2.4
RHBDD3-203ENST00000413137 DSG3P32926 999 aa30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 PFKFB3Q16875 520 aaPredicted RBP30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 DEFB115Q30KQ5 88 aa30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 FAM43AQ8N2R8 423 aa30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 FAM184AQ8NB25 1140 aa30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 P2RX7Q99572 595 aaKnown RBP30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 ALG1Q9BT22 464 aa30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 ASCC2Q9H1I8 757 aaPredicted RBP30.01■■■□□ 2.39
RHBDD3-203ENST00000413137 RLFQ13129 1914 aa30■■■□□ 2.39
RHBDD3-203ENST00000413137 TESPA1A2RU30 521 aaPredicted RBP30■■■□□ 2.39
RHBDD3-203ENST00000413137 ZBTB5O15062 677 aa30■■■□□ 2.39
RHBDD3-203ENST00000413137 DDIT3P35638 169 aa30■■■□□ 2.39
RHBDD3-203ENST00000413137 OTUD7BQ6GQQ9 843 aa30■■■□□ 2.39
RHBDD3-203ENST00000413137 RANBP17Q9H2T7 1088 aaKnown RBP30■■■□□ 2.39
RHBDD3-203ENST00000413137 PNMA6FA0A0J9YX94 578 aa29.99■■■□□ 2.39
RHBDD3-203ENST00000413137 SPDYE16A6NNV3 312 aaPredicted RBP29.99■■■□□ 2.39
RHBDD3-203ENST00000413137 PEX10O60683 326 aa29.99■■■□□ 2.39
RHBDD3-203ENST00000413137 SCG2P13521 617 aa29.99■■■□□ 2.39
RHBDD3-203ENST00000413137 WWC2Q6AWC2 1192 aa29.99■■■□□ 2.39
RHBDD3-203ENST00000413137 PDHXO00330 501 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 TYW1BQ6NUM6 668 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 CCDC174Q6PII3 467 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 CWC22Q9HCG8 908 aaKnown RBP29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 SEC63Q9UGP8 760 aaKnown RBP29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 ADAMTS5Q9UNA0 930 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 MANSC4A6NHS7 340 aaPredicted RBP29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 VWA5AO00534 786 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 PKP1Q13835 747 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms