RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ESRRAP11474 423 aaPredicted RBP6.94□□□□□ -1.3
LINC00342-201ENST00000412393 FUT4P22083 530 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 U2AF1Q01081 240 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC00342-201ENST00000412393 TEFQ10587 303 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 OGFOD3Q6PK18 319 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 DNAJC10Q8IXB1 793 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 NLGN1Q8N2Q7 840 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 IL17REQ8NFR9 667 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 KCPQ6ZWJ8 1503 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 KIAA1551Q9HCM1 1747 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 AFDNP55196 1824 aaKnown RBP6.93□□□□□ -1.3
LINC00342-201ENST00000412393 GRIN3BO60391 1043 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 CYP11A1P05108 521 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 NFICP08651 508 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 TTC5Q8N0Z6 440 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 PHACTR3Q96KR7 559 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 HHIPQ96QV1 700 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 ACSS3Q9H6R3 686 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 CCDC87Q9NVE4 849 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 FAM53CQ9NYF3 392 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 ACTL7BQ9Y614 415 aa6.93□□□□□ -1.3
LINC00342-201ENST00000412393 BRCA1P38398 1863 aaKnown RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 GYS1P13807 737 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 ACPPP15309 386 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 GSTM4Q03013 218 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 NAA30Q147X3 362 aaPredicted RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 WFDC3Q8IUB2 231 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 TOX2Q96NM4 488 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 ZKSCAN3Q9BRR0 538 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 NRSN2Q9GZP1 204 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 RC3H2Q9HBD1 1191 aaKnown RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 SRP68Q9UHB9 627 aaKnown RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 VAV3Q9UKW4 847 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 SYNGAP1Q96PV0 1343 aa6.92□□□□□ -1.3
LINC00342-201ENST00000412393 USP42Q9H9J4 1324 aaKnown RBP6.92□□□□□ -1.3
LINC00342-201ENST00000412393 STARD3NLO95772 234 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 NEFMP07197 916 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 TMEM132AQ24JP5 1023 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 ZNF790Q6PG37 636 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 SPRED2Q7Z698 418 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 RTF1Q92541 710 aaKnown RBP6.91□□□□□ -1.3
LINC00342-201ENST00000412393 MKNK1Q9BUB5 465 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 CHRDQ9H2X0 955 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 SOS1Q07889 1333 aaPredicted RBP6.91□□□□□ -1.3
LINC00342-201ENST00000412393 CEMIPQ8WUJ3 1361 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 HEG1Q9ULI3 1381 aa6.91□□□□□ -1.3
LINC00342-201ENST00000412393 ARFGEF1Q9Y6D6 1849 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 RAB6AP20340 208 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 CANXP27824 592 aaKnown RBP6.9□□□□□ -1.3
LINC00342-201ENST00000412393 TGFB2P61812 414 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
LINC00342-201ENST00000412393 LCE5AQ5TCM9 118 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 ZNF574Q6ZN55 896 aaPredicted RBP6.9□□□□□ -1.3
LINC00342-201ENST00000412393 NETO1Q8TDF5 533 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 ZNF496Q96IT1 587 aaPredicted RBP6.9□□□□□ -1.3
LINC00342-201ENST00000412393 TEX13AQ9BXU3 409 aaPredicted RBP6.9□□□□□ -1.3
LINC00342-201ENST00000412393 MKNK2Q9HBH9 465 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 ZBTB1Q9Y2K1 713 aa6.9□□□□□ -1.3
LINC00342-201ENST00000412393 COL15A1P39059 1388 aa6.9□□□□□ -1.31
LINC00342-201ENST00000412393 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.31
LINC00342-201ENST00000412393 PXDNLA1KZ92 1463 aa6.9□□□□□ -1.31
LINC00342-201ENST00000412393 A0A0G2JLW4 131 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 KCNQ3O43525 872 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 HTATSF1O43719 755 aaKnown RBP6.89□□□□□ -1.31
LINC00342-201ENST00000412393 TRPA1O75762 1119 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 PRKCQQ04759 706 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 DDR1Q08345 913 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 DCTN1Q14203 1278 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 RALBP1Q15311 655 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 USPL1Q5W0Q7 1092 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 CAPN12Q6ZSI9 719 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 MCM10Q7L590 875 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 SIAH1Q8IUQ4 282 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 ZSCAN18Q8TBC5 510 aaPredicted RBP6.89□□□□□ -1.31
LINC00342-201ENST00000412393 PPP1R16BQ96T49 567 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 NARFQ9UHQ1 456 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 RAPGEFL1Q9UHV5 662 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.89□□□□□ -1.31
LINC00342-201ENST00000412393 SCN7AQ01118 1682 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 NRXN2Q9P2S2 1712 aa6.89□□□□□ -1.31
LINC00342-201ENST00000412393 CCDC88AQ3V6T2 1871 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 LAMB4A4D0S4 1761 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 BCORQ6W2J9 1755 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 KDM3BQ7LBC6 1761 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 A0A087WZG4 1122 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 NEFLP07196 543 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 DPEP1P16444 411 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
LINC00342-201ENST00000412393 TM4SF1P30408 202 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 EIF5P55010 431 aaKnown RBP6.88□□□□□ -1.31
LINC00342-201ENST00000412393 MESP2Q0VG99 397 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 DYMQ7RTS9 669 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms