RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 DDAH1O94760 285 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 PSMC4P43686 418 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 ZNF543Q08ER8 600 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 WTAPQ15007 396 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 CYB5R4Q7L1T6 521 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 SGMS1Q86VZ5 419 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 RIOX2Q8IUF8 465 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
RPE-204ENST00000411934 REPS2Q8NFH8 660 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 IGDCC4Q8TDY8 1250 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 ATG4CQ96DT6 458 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 IL17RAQ96F46 866 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 USP26Q9BXU7 913 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 MROH8Q9H579 483 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 SLC38A10Q9HBR0 1119 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 TXNRD2Q9NNW7 524 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 ZNF214Q9UL59 606 aaPredicted RBP9.62□□□□□ -0.87
RPE-204ENST00000411934 PTPN22Q9Y2R2 807 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 TRIM17Q9Y577 477 aa9.62□□□□□ -0.87
RPE-204ENST00000411934 COL11A1P12107 1806 aaPredicted RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 TMEM232C9JQI7 657 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 SH2B2O14492 632 aaPredicted RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 PRC1O43663 620 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 ZBED4O75132 1171 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 CALM1P0DP23 149 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 CALM2P0DP24 149 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 CALM3P0DP25 149 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 CAPN2P17655 700 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 ANTXR2P58335 489 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 CCDC96Q2M329 555 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 TKFCQ3LXA3 575 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 COL13A1Q5TAT6 717 aaPredicted RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 CCAR1Q8IX12 1150 aaKnown RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 PXYLP1Q8TE99 480 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 ZKSCAN3Q9BRR0 538 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 PAGR1Q9BTK6 254 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 FBXO40Q9UH90 709 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
RPE-204ENST00000411934 TAF6LQ9Y6J9 622 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
RPE-204ENST00000411934 SLC15A5A6NIM6 579 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 HOXC6P09630 235 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 PARP1P09874 1014 aaKnown RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 SMARCA1P28370 1054 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 KIF5BP33176 963 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 STAT3P40763 770 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 EXOSC10Q01780 885 aaKnown RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 TROAPQ12815 778 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 TRAF1Q13077 416 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 PPP2R5BQ15173 497 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 SYDE2Q5VT97 1194 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 GPR142Q7Z601 462 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 PLEKHH3Q7Z736 793 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 CATIPQ7Z7H3 387 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 SLAIN1Q8ND83 568 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 NKX2-3Q8TAU0 364 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 NUP88Q99567 741 aaPredicted RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 APBA2Q99767 749 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 MOV10L1Q9BXT6 1211 aaKnown RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 AGXT2Q9BYV1 514 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 MCOLN1Q9GZU1 580 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 RANBP17Q9H2T7 1088 aaKnown RBP9.6□□□□□ -0.87
RPE-204ENST00000411934 LY9Q9HBG7 655 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 FBXO28Q9NVF7 368 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 ZSWIM8A7E2V4 1837 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 NID2Q14112 1375 aa9.6□□□□□ -0.87
RPE-204ENST00000411934 PLXNB2O15031 1838 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 CCDC69A6NI79 296 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 PTPREP23469 700 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 CTGFP29279 349 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 RGS2P41220 211 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 GNAQP50148 359 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 CLCN6P51797 869 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 GRB14Q14449 540 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 GRM4Q14833 912 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 Q3C1V9 767 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 C8orf34Q49A92 452 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 MORN1Q5T089 497 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 KCTD1Q719H9 257 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 NBPF11Q86T75 865 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
RPE-204ENST00000411934 TNS4Q8IZW8 715 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms