RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PRRC2AP48634 2157 aaKnown RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 TNFRSF13BO14836 293 aaPredicted RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 IRF6O14896 467 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 CYP11A1P05108 521 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 SCNN1AP37088 669 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 EPHA4P54764 986 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 HNRNPKP61978 463 aaKnown RBP eCLIP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 TTLL4Q14679 1199 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 CBX2Q14781 532 aaPredicted RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 POU4F3Q15319 338 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 OXLD1Q5BKU9 147 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 SFRP5Q5T4F7 317 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 ZC3H14Q6PJT7 736 aaKnown RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 C18orf65Q6ZTR6 163 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 CEP120Q8N960 986 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 TXNDC5Q8NBS9 432 aaKnown RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 ARHGEF1Q92888 912 aaKnown RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 ZNF48Q96MX3 618 aaPredicted RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 BEGAINQ9BUH8 593 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 WDR18Q9BV38 432 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 RNF38Q9H0F5 515 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 TOR3AQ9H497 397 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 SSU72Q9NP77 194 aaKnown RBP-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 EBF1Q9UH73 591 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 PRO0461Q9UI25 63 aa-0.04□□□□□ -2.42
RNU4-88P-201ENST00000411220 KIF26BQ2KJY2 2108 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 NRDCO43847 1150 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 SMARCA5O60264 1052 aaPredicted RBP-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 ACO1P21399 889 aaKnown RBP-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 ARL4AP40617 200 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 SRSF4Q08170 494 aaKnown RBP-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 AWAT2Q6E213 333 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 VN1R5Q7Z5H4 357 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 KRT77Q7Z794 578 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 BOLLQ8N9W6 283 aaKnown RBP-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 CTAGE1Q96RT6 745 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 LRFN3Q9BTN0 628 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 INSL6Q9Y581 213 aa-0.05□□□□□ -2.42
RNU4-88P-201ENST00000411220 C9orf118A6NHY6 69 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 IGKV3-20P01619 116 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 RPL13P26373 211 aaKnown RBP-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 THBS3P49746 956 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 SLC14A2Q15849 920 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 KRTAP24-1Q3LI83 254 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 RPTNQ6XPR3 784 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 B3GNT8Q7Z7M8 397 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 VRK3Q8IV63 474 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 ZNF524Q96C55 264 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 HERPUD2Q9BSE4 406 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 DISC1Q9NRI5 854 aa-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 AURKAIP1Q9NWT8 199 aaPredicted RBP-0.06□□□□□ -2.42
RNU4-88P-201ENST00000411220 EME2A4GXA9 379 aaPredicted RBP-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 ANTXRLA6NF34 631 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 CGB1A6NKQ9 187 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 PDE2AO00408 941 aaPredicted RBP-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 DDNO94850 711 aaPredicted RBP-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 ESRRAP11474 423 aaPredicted RBP-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 MAPKAPK2P49137 400 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 TRA2BP62995 288 aaKnown RBP-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 ID3Q02535 119 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 GAB4Q2WGN9 574 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 TSGA10IPQ3SY00 556 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 NLRP13Q86W25 1043 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 NCAPG2Q86XI2 1143 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 LINC01599Q8WXQ3 324 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 BSNDQ8WZ55 320 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 ISL2Q96A47 359 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 ZBTB8AQ96BR9 441 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 EBF3Q9H4W6 596 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 KMT5AQ9NQR1 393 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 PARPBPQ9NWS1 579 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 CEP72Q9P209 647 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 DUSP13Q9UII6 198 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 ZNF330Q9Y3S2 320 aaPredicted RBP-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 SMAD5-AS1Q9Y6J3 95 aa-0.07□□□□□ -2.42
RNU4-88P-201ENST00000411220 NFKBIEO00221 500 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 RPL10P27635 214 aaKnown RBP-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 TPP2P29144 1249 aaPredicted RBP-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 COMPP49747 757 aaPredicted RBP-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 NHLH1Q02575 133 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 TNK2Q07912 1038 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 C9orf50Q5SZB4 431 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 OTUD3Q5T2D3 398 aaPredicted RBP-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 C11orf87Q6NUJ2 197 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 CMTR1Q8N1G2 835 aaKnown RBP-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 ACRBPQ8NEB7 543 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 MARK4Q96L34 752 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 GNRHR2Q96P88 292 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 NOX5Q96PH1 765 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 CBLCQ9ULV8 474 aa-0.08□□□□□ -2.42
RNU4-88P-201ENST00000411220 ZNF521Q96K83 1311 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 WASH4PA8MWX3 477 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 NCAM1P13591 858 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 MC3RP41968 323 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 HECTD2Q5U5R9 776 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 Q6ZSN1 163 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 TNS4Q8IZW8 715 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 GIMAP8Q8ND71 665 aaPredicted RBP-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 FBXO18Q8NFZ0 1043 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 FAM89AQ96GI7 184 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms