RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 GTF3C6Q969F1 213 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 MTMR8Q96EF0 704 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 TMX3Q96JJ7 454 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.42
LSM5-207ENST00000410044 PDHXO00330 501 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 IGF2BP3O00425 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
LSM5-207ENST00000410044 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
LSM5-207ENST00000410044 AOC2O75106 756 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 NOL8Q76FK4 1167 aaKnown RBP17.7■□□□□ 0.42
LSM5-207ENST00000410044 CCDC144CPQ8IYA2 1237 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 SRBD1Q8N5C6 995 aaKnown RBP17.7■□□□□ 0.42
LSM5-207ENST00000410044 SLF1Q9BQI6 1058 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 TANGO6Q9C0B7 1094 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 UBA5Q9GZZ9 404 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
LSM5-207ENST00000410044 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 PNMA3Q9UL41 463 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 PPP1R9AQ9ULJ8 1098 aa17.7■□□□□ 0.42
LSM5-207ENST00000410044 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
LSM5-207ENST00000410044 THSD7BQ9C0I4 1608 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
LSM5-207ENST00000410044 CYTH3O43739 400 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 IFNAR1P17181 557 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 STK3Q13188 491 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 CUL4AQ13619 759 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 SYDE2Q5VT97 1194 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 DNAJC5GQ8N7S2 189 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 P2RX7Q99572 595 aaKnown RBP17.69■□□□□ 0.42
LSM5-207ENST00000410044 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
LSM5-207ENST00000410044 FBXO28Q9NVF7 368 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 PRR12Q9ULL5 1215 aa17.69■□□□□ 0.42
LSM5-207ENST00000410044 FLOT1O75955 427 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 SLC16A2P36021 539 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 IRX3P78415 501 aaPredicted RBP17.68■□□□□ 0.42
LSM5-207ENST00000410044 GRM1Q13255 1194 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 GTF3C2Q8WUA4 911 aaPredicted RBP17.68■□□□□ 0.42
LSM5-207ENST00000410044 LLPHQ9BRT6 129 aaKnown RBP17.68■□□□□ 0.42
LSM5-207ENST00000410044 JMJD4Q9H9V9 463 aa17.68■□□□□ 0.42
LSM5-207ENST00000410044 BAZ2BQ9UIF8 2168 aaKnown RBP17.68■□□□□ 0.42
LSM5-207ENST00000410044 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
LSM5-207ENST00000410044 CPLX2Q6PUV4 134 aaKnown RBP17.67■□□□□ 0.42
LSM5-207ENST00000410044 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
LSM5-207ENST00000410044 CFHR5Q9BXR6 569 aa17.67■□□□□ 0.42
LSM5-207ENST00000410044 RANBP17Q9H2T7 1088 aaKnown RBP17.67■□□□□ 0.42
LSM5-207ENST00000410044 CPVLQ9H3G5 476 aa17.67■□□□□ 0.42
LSM5-207ENST00000410044 VWA5AO00534 786 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 CPLX1O14810 134 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
LSM5-207ENST00000410044 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 HERVK_113P62684 666 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 MB21D1Q8N884 522 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 REPS2Q8NFH8 660 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 KIFC2Q96AC6 838 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 ATG4CQ96DT6 458 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 PARK7Q99497 189 aaKnown RBP17.66■□□□□ 0.42
LSM5-207ENST00000410044 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
LSM5-207ENST00000410044 SLC38A10Q9HBR0 1119 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 RBM27Q9P2N5 1060 aaKnown RBP17.66■□□□□ 0.42
LSM5-207ENST00000410044 CNTNAP5Q8WYK1 1306 aa17.66■□□□□ 0.42
LSM5-207ENST00000410044 CA12O43570 354 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 CDKL5O76039 1030 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 GCLCP48506 637 aaPredicted RBP17.65■□□□□ 0.42
LSM5-207ENST00000410044 OAZ1P54368 228 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 IKQ13123 557 aaPredicted RBP17.65■□□□□ 0.42
LSM5-207ENST00000410044 CCDC83Q8IWF9 413 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 CMTR1Q8N1G2 835 aaKnown RBP17.65■□□□□ 0.42
LSM5-207ENST00000410044 NSUN7Q8NE18 718 aaKnown RBP17.65■□□□□ 0.42
LSM5-207ENST00000410044 SMARCC2Q8TAQ2 1214 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 RBPJLQ9UBG7 517 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 ISY1Q9ULR0 285 aaKnown RBP17.65■□□□□ 0.42
LSM5-207ENST00000410044 RABGAP1Q9Y3P9 1069 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 ADGRA2Q96PE1 1338 aa17.65■□□□□ 0.42
LSM5-207ENST00000410044 COL11A1P12107 1806 aaPredicted RBP17.65■□□□□ 0.42
LSM5-207ENST00000410044 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 ZBTB5O15062 677 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 ZBED4O75132 1171 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.41
LSM5-207ENST00000410044 CYP2C8P10632 490 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 RRP36Q96EU6 259 aaKnown RBP17.64■□□□□ 0.41
LSM5-207ENST00000410044 INTS4Q96HW7 963 aaKnown RBP17.64■□□□□ 0.41
LSM5-207ENST00000410044 ZFYVE28Q9HCC9 887 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 PNMA2Q9UL42 364 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
LSM5-207ENST00000410044 V9GY48 417 aaPredicted RBP17.64■□□□□ 0.41
LSM5-207ENST00000410044 MYH6P13533 1939 aa17.64■□□□□ 0.41
LSM5-207ENST00000410044 TLR2O60603 784 aa17.63■□□□□ 0.41
LSM5-207ENST00000410044 CNMDO75829 334 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms