RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 KIFC2Q96AC6 838 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 LZTS2Q9BRK4 669 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 ZFYVE28Q9HCC9 887 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 LIMCH1Q9UPQ0 1083 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 HPS5Q9UPZ3 1129 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 NID2Q14112 1375 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 CYP2C8P10632 490 aa24■■□□□ 1.43
C4orf48-202ENST00000409860 HERVK_113P62684 666 aa24■■□□□ 1.43
C4orf48-202ENST00000409860 SYDE2Q5VT97 1194 aa24■■□□□ 1.43
C4orf48-202ENST00000409860 P2RX7Q99572 595 aaKnown RBP24■■□□□ 1.43
C4orf48-202ENST00000409860 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
C4orf48-202ENST00000409860 SPDYE16A6NNV3 312 aaPredicted RBP23.99■■□□□ 1.43
C4orf48-202ENST00000409860 SLC16A2P36021 539 aa23.99■■□□□ 1.43
C4orf48-202ENST00000409860 STK3Q13188 491 aa23.99■■□□□ 1.43
C4orf48-202ENST00000409860 ZSCAN31Q96LW9 406 aaPredicted RBP23.99■■□□□ 1.43
C4orf48-202ENST00000409860 UBA5Q9GZZ9 404 aa23.99■■□□□ 1.43
C4orf48-202ENST00000409860 CTDP1Q9Y5B0 961 aaPredicted RBP23.99■■□□□ 1.43
C4orf48-202ENST00000409860 CA12O43570 354 aa23.98■■□□□ 1.43
C4orf48-202ENST00000409860 DHX16O60231 1041 aaKnown RBP23.98■■□□□ 1.43
C4orf48-202ENST00000409860 CCT2P78371 535 aaKnown RBP23.98■■□□□ 1.43
C4orf48-202ENST00000409860 LBX2Q6XYB7 198 aa23.98■■□□□ 1.43
C4orf48-202ENST00000409860 TMTC3Q6ZXV5 915 aa23.98■■□□□ 1.43
C4orf48-202ENST00000409860 ATG4CQ96DT6 458 aa23.98■■□□□ 1.43
C4orf48-202ENST00000409860 BEGAINQ9BUH8 593 aa23.98■■□□□ 1.43
C4orf48-202ENST00000409860 PRR12Q9ULL5 1215 aa23.98■■□□□ 1.43
C4orf48-202ENST00000409860 PFKFB2O60825 505 aa23.97■■□□□ 1.43
C4orf48-202ENST00000409860 FDX1P10109 184 aa23.97■■□□□ 1.43
C4orf48-202ENST00000409860 GCLCP48506 637 aaPredicted RBP23.97■■□□□ 1.43
C4orf48-202ENST00000409860 ME3Q16798 604 aa23.97■■□□□ 1.43
C4orf48-202ENST00000409860 MB21D1Q8N884 522 aa23.97■■□□□ 1.43
C4orf48-202ENST00000409860 SH2B1Q9NRF2 756 aaPredicted RBP23.97■■□□□ 1.43
C4orf48-202ENST00000409860 RNF186Q9NXI6 227 aa23.97■■□□□ 1.43
C4orf48-202ENST00000409860 ZBED4O75132 1171 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 PLEKHA8P1O95397 391 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 SMARCA1P28370 1054 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 CDC27P30260 824 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 CRHR2Q13324 411 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 CPLX2Q6PUV4 134 aaKnown RBP23.96■■□□□ 1.43
C4orf48-202ENST00000409860 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 CPVLQ9H3G5 476 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 FAM217BQ9NTX9 383 aaPredicted RBP23.96■■□□□ 1.43
C4orf48-202ENST00000409860 SAGE1Q9NXZ1 904 aa23.96■■□□□ 1.43
C4orf48-202ENST00000409860 VWA5AO00534 786 aa23.95■■□□□ 1.42
C4orf48-202ENST00000409860 CPLX1O14810 134 aa23.95■■□□□ 1.42
C4orf48-202ENST00000409860 TRPA1O75762 1119 aa23.95■■□□□ 1.42
C4orf48-202ENST00000409860 CD2BP2O95400 341 aaKnown RBP23.95■■□□□ 1.42
C4orf48-202ENST00000409860 ADD1P35611 737 aaKnown RBP23.95■■□□□ 1.42
C4orf48-202ENST00000409860 ADGRF4Q8IZF3 695 aa23.95■■□□□ 1.42
C4orf48-202ENST00000409860 NCOA5Q9HCD5 579 aaKnown RBP23.95■■□□□ 1.42
C4orf48-202ENST00000409860 ADAMTS5Q9UNA0 930 aa23.95■■□□□ 1.42
C4orf48-202ENST00000409860 ADGRA2Q96PE1 1338 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 TLR2O60603 784 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 LARGE1O95461 756 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 SCRN1Q12765 414 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 SRBD1Q8N5C6 995 aaKnown RBP23.94■■□□□ 1.42
C4orf48-202ENST00000409860 GTF3C6Q969F1 213 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 PAGR1Q9BTK6 254 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 CFHR5Q9BXR6 569 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 RIOX1Q9H6W3 641 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 SLC38A10Q9HBR0 1119 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 VAT1LQ9HCJ6 419 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 RABGAP1Q9Y3P9 1069 aa23.94■■□□□ 1.42
C4orf48-202ENST00000409860 NBPF11Q86T75 865 aa23.93■■□□□ 1.42
C4orf48-202ENST00000409860 CMTR1Q8N1G2 835 aaKnown RBP23.93■■□□□ 1.42
C4orf48-202ENST00000409860 RANBP17Q9H2T7 1088 aaKnown RBP23.93■■□□□ 1.42
C4orf48-202ENST00000409860 JMJD4Q9H9V9 463 aa23.93■■□□□ 1.42
C4orf48-202ENST00000409860 CDKL5O76039 1030 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 CDC37Q16543 378 aaPredicted RBP23.92■■□□□ 1.42
C4orf48-202ENST00000409860 CCDC82Q8N4S0 544 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 ANKRD13CQ8N6S4 541 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 NECAB1Q8N987 351 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 JMYQ8N9B5 988 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 SNX21Q969T3 373 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 RRP36Q96EU6 259 aaKnown RBP23.92■■□□□ 1.42
C4orf48-202ENST00000409860 WBP1LQ9NX94 342 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 CPA4Q9UI42 421 aa23.92■■□□□ 1.42
C4orf48-202ENST00000409860 CNTNAP5Q8WYK1 1306 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 CYTH3O43739 400 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 TBC1D8O95759 1140 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 OAZ1P54368 228 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 SNAP25P60880 206 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 FAM110CQ1W6H9 321 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 SLC35G1Q2M3R5 365 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 CCDC174Q6PII3 467 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 HOMER1Q86YM7 354 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 HSCBQ8IWL3 235 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 REPS2Q8NFH8 660 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 GPRC5AQ8NFJ5 357 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 TMX3Q96JJ7 454 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 RBPJLQ9UBG7 517 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 MORF4L1Q9UBU8 362 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 SEC63Q9UGP8 760 aaKnown RBP23.91■■□□□ 1.42
C4orf48-202ENST00000409860 PNMA2Q9UL42 364 aa23.91■■□□□ 1.42
C4orf48-202ENST00000409860 CNMDO75829 334 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 BCRP11274 1271 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 IFNAR1P17181 557 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 PLS1Q14651 629 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 TMEM132BQ14DG7 1078 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 C17orf99Q6UX52 265 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 MTMR8Q96EF0 704 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms