RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 RPAP3Q9H6T3 665 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 FRMD4BQ9Y2L6 1034 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 CCDC66A2RUB6 948 aa8.4□□□□□ -1.07
SH3D19-203ENST00000409598 MTIF2P46199 727 aaKnown RBP8.4□□□□□ -1.07
SH3D19-203ENST00000409598 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.07
SH3D19-203ENST00000409598 TSHZ3Q63HK5 1081 aa8.4□□□□□ -1.07
SH3D19-203ENST00000409598 OR6J1Q8NGC5 347 aa8.4□□□□□ -1.07
SH3D19-203ENST00000409598 PARP2Q9UGN5 583 aa8.4□□□□□ -1.07
SH3D19-203ENST00000409598 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.07
SH3D19-203ENST00000409598 PHLPP1O60346 1717 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 PSAPP07602 524 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 STAG3L1P0CL83 205 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 CPT1AP50416 773 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 DSCC1Q9BVC3 393 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 TEX13BQ9BXU2 312 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 TNMDQ9H2S6 317 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 ZSCAN16Q9H4T2 348 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-203ENST00000409598 DPP7Q9UHL4 492 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 ABCB11O95342 1321 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-203ENST00000409598 RIPOR2Q9Y4F9 1068 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 SMCO2A6NFE2 343 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 KPNA6O60684 536 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 XRCC6P12956 609 aaKnown RBP eCLIP8.39□□□□□ -1.07
SH3D19-203ENST00000409598 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 RIOK1Q9BRS2 568 aaKnown RBP8.39□□□□□ -1.07
SH3D19-203ENST00000409598 WDR11Q9BZH6 1224 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 CSPG5O95196 566 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 ACTN2P35609 894 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 MRPS9P82933 396 aaKnown RBP8.39□□□□□ -1.07
SH3D19-203ENST00000409598 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 SLITRK6Q9H5Y7 841 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 SLC8A2Q9UPR5 921 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 MROH2AA6NES4 1674 aa8.39□□□□□ -1.07
SH3D19-203ENST00000409598 CCNT1O60563 726 aaKnown RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 HOXC6P09630 235 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 MTMR2Q13614 643 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 PKN2Q16513 984 aaKnown RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CFAP58Q5T655 872 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 ARMCX5Q6P1M9 558 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 GIMAP6Q6P9H5 292 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 SMIM5Q71RC9 77 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 SV2BQ7L1I2 683 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 NECAB2Q7Z6G3 386 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 TCP11Q8WWU5 503 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 ANO3Q9BYT9 981 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 GPRC5DQ9NZD1 345 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 UBN2Q6ZU65 1347 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 DISP2A7MBM2 1401 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 STX10O60499 249 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 NTSR2O95665 410 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 PPP1R2P41236 205 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 HAUS7Q99871 368 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 NT5C3AQ9H0P0 336 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 TTC12Q9H892 705 aaPredicted RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 RRAGDQ9NQL2 400 aaPredicted RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 PFASO15067 1338 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 TNNC2P02585 160 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 MCM7P33993 719 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 PSMC4P43686 418 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CDK8P49336 464 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 SLC10A5Q5PT55 438 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 TEX35Q5T0J7 233 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 MROH8Q9H579 483 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.38□□□□□ -1.07
SH3D19-203ENST00000409598 KRT17Q04695 432 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 NSMCE1Q8WV22 266 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 TTC14Q96N46 770 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 RICTORQ6R327 1708 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 MYPNQ86TC9 1320 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 KDM3AQ9Y4C1 1321 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CALCRLQ16602 461 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CHST13Q8NET6 341 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CAGE1Q8TC20 777 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 SSH3Q8TE77 659 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 PLA2G12BQ9BX93 195 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 STARD7Q9NQZ5 370 aa8.38□□□□□ -1.07
SH3D19-203ENST00000409598 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 CCP110O43303 1012 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 FAM83BQ5T0W9 1011 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 TAF4BQ92750 862 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 ESYT1Q9BSJ8 1104 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 NUCB1Q02818 461 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 ALS2CR12Q96Q35 445 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 PANK2Q9BZ23 570 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 FAM49AQ9H0Q0 323 aaPredicted RBP8.37□□□□□ -1.07
SH3D19-203ENST00000409598 PTPREP23469 700 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 CBX1P83916 185 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
SH3D19-203ENST00000409598 MED10Q9BTT4 135 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms