RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 N4BP3O15049 544 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 ADD2P35612 726 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 RPGRIP1Q96KN7 1286 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 LY9Q9HBG7 655 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 FAM217BQ9NTX9 383 aaPredicted RBP17.36■□□□□ 0.37
LIMS2-205ENST00000409455 GUCA1BQ9UMX6 200 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 SERPINB2P05120 415 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 GGCXP38435 758 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 AFMP43652 599 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 GYG1P46976 350 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
LIMS2-205ENST00000409455 CCDC91Q7Z6B0 441 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 KCNJ14Q9UNX9 436 aa17.36■□□□□ 0.37
LIMS2-205ENST00000409455 MYH8P13535 1937 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 LOC102724159A0A0B4J2E5 919 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 PSMD14O00487 310 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 EBAG9O00559 213 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 CKAP4Q07065 602 aaKnown RBP17.35■□□□□ 0.37
LIMS2-205ENST00000409455 PWP2Q15269 919 aaKnown RBP17.35■□□□□ 0.37
LIMS2-205ENST00000409455 SWT1Q5T5J6 900 aaKnown RBP17.35■□□□□ 0.37
LIMS2-205ENST00000409455 POTEAQ6S8J7 498 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 RIN2Q8WYP3 895 aaPredicted RBP17.35■□□□□ 0.37
LIMS2-205ENST00000409455 GSDMAQ96QA5 445 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
LIMS2-205ENST00000409455 SAR1BQ9Y6B6 198 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 GOLGA6CA6NDK9 693 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 GOLGA6DP0CG33 693 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 IFNAR1P17181 557 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 USP49Q70CQ1 688 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 GOLGA6AQ9NYA3 693 aa17.35■□□□□ 0.37
LIMS2-205ENST00000409455 ZC3H4Q9UPT8 1303 aaKnown RBP17.34■□□□□ 0.37
LIMS2-205ENST00000409455 KRT9P35527 623 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 CCT5P48643 541 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 SMYD4Q8IYR2 804 aaPredicted RBP17.34■□□□□ 0.37
LIMS2-205ENST00000409455 NKX2-3Q8TAU0 364 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 ENC1O14682 589 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 KRT31Q15323 416 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 E2F4Q16254 413 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 HAUS4Q9H6D7 363 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 CTNND2Q9UQB3 1225 aa17.34■□□□□ 0.37
LIMS2-205ENST00000409455 GOLGA6BA6NDN3 693 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 NDUFA10O95299 355 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 GUCY1A2P33402 732 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 LIFRP42702 1097 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 SPAG1Q07617 926 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 PAGE5Q96GU1 130 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 GDAP1L1Q96MZ0 367 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 SELENOOQ9BVL4 669 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 KAT14Q9H8E8 782 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 EPN1Q9Y6I3 576 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-205ENST00000409455 ZNF532Q9HCE3 1301 aa17.33■□□□□ 0.36
LIMS2-205ENST00000409455 SHTN1A0MZ66 631 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 PDE6AP16499 860 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
LIMS2-205ENST00000409455 USP8P40818 1118 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 LIG3P49916 1009 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 DDR1Q08345 913 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 NR5A1Q13285 461 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 GPATCH11Q8N954 259 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 AKT1S1Q96B36 256 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
LIMS2-205ENST00000409455 HDAC6Q9UBN7 1215 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 TRIM10Q9UDY6 481 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 LIMA1Q9UHB6 759 aaKnown RBP17.32■□□□□ 0.36
LIMS2-205ENST00000409455 FAM169AQ9Y6X4 670 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 MYO5AQ9Y4I1 1855 aaKnown RBP17.32■□□□□ 0.36
LIMS2-205ENST00000409455 IFIT3O14879 490 aaKnown RBP17.32■□□□□ 0.36
LIMS2-205ENST00000409455 KLRK1P26718 216 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 CDC25AP30304 524 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 EHBP1Q8NDI1 1231 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 FAM84BQ96KN1 310 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-205ENST00000409455 VPS16Q9H269 839 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 ZNF804BA4D1E1 1349 aa17.32■□□□□ 0.36
LIMS2-205ENST00000409455 TCRBV5S4A2TA0A5A2 114 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 IRAK1P51617 712 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 DPYDQ12882 1025 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 PPFIA1Q13136 1202 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
LIMS2-205ENST00000409455 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 CAGE1Q8TC20 777 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 CAPZA3Q96KX2 299 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 MYH7P12883 1935 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 ARAP2Q8WZ64 1704 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 LRRC10BA6NIK2 292 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 POLRMTO00411 1230 aaKnown RBP17.31■□□□□ 0.36
LIMS2-205ENST00000409455 ATP1A1P05023 1023 aaKnown RBP17.31■□□□□ 0.36
LIMS2-205ENST00000409455 CASP1P29466 404 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 PAPD7Q5XG87 772 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms