RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CCDC17Q96LX7 622 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 GUCD1Q96NT3 240 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 CDX2Q99626 313 aaPredicted RBP9.35□□□□□ -0.91
LSM5-202ENST00000409292 MOV10L1Q9BXT6 1211 aaKnown RBP9.35□□□□□ -0.91
LSM5-202ENST00000409292 CCDC8Q9H0W5 538 aaPredicted RBP9.35□□□□□ -0.91
LSM5-202ENST00000409292 XPNPEP3Q9NQH7 507 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.35□□□□□ -0.91
LSM5-202ENST00000409292 FLRT1Q9NZU1 646 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 BTBD7Q9P203 1132 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
LSM5-202ENST00000409292 CNPY2Q9Y2B0 182 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
LSM5-202ENST00000409292 DCDC2CA8MYV0 355 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 BCAR3O75815 825 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 SEPT2Q15019 361 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 SHROOM1Q2M3G4 852 aaPredicted RBP9.34□□□□□ -0.91
LSM5-202ENST00000409292 C1orf53Q5VUE5 145 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 AACSQ86V21 672 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 CLASRPQ8N2M8 674 aaKnown RBP9.34□□□□□ -0.91
LSM5-202ENST00000409292 TMEM57Q8N5G2 664 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 NUP133Q8WUM0 1156 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 BADQ92934 168 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 MMP19Q99542 508 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.34□□□□□ -0.91
LSM5-202ENST00000409292 SEMA6BQ9H3T3 888 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 SPC25Q9HBM1 224 aa9.34□□□□□ -0.91
LSM5-202ENST00000409292 NOP58Q9Y2X3 529 aaKnown RBP9.34□□□□□ -0.91
LSM5-202ENST00000409292 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
LSM5-202ENST00000409292 RANBP2P49792 3224 aaKnown RBP9.33□□□□□ -0.92
LSM5-202ENST00000409292 MYH1P12882 1939 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 WDR46O15213 610 aaKnown RBP9.33□□□□□ -0.92
LSM5-202ENST00000409292 RAD21O60216 631 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 CLTBP09497 229 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 MS4A1P11836 297 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 SHMT1P34896 483 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 TLE2Q04725 743 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 ICA1Q05084 483 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 FPGSQ05932 587 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 LRRC41Q15345 812 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 SLC9C2Q5TAH2 1124 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 ANO1Q5XXA6 986 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 FERMT2Q96AC1 680 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
LSM5-202ENST00000409292 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
LSM5-202ENST00000409292 MROH7Q68CQ1 1323 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 SZT2Q5T011 3432 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 CCER2I3L3R5 266 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 HMMRO75330 724 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 RGS20O76081 388 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 AKR1A1P14550 325 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 PLCD1P51178 756 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 SNX17Q15036 470 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 MYLIPQ8WY64 445 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 EAF2Q96CJ1 260 aaPredicted RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 DDX11Q96FC9 970 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 MAML3Q96JK9 1138 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 MTIF3Q9H2K0 278 aaKnown RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 VCPKMTQ9H867 229 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 STARD7Q9NQZ5 370 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 PDLIM7Q9NR12 457 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 ATP8A2Q9NTI2 1148 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 DIS3Q9Y2L1 958 aaKnown RBP9.32□□□□□ -0.92
LSM5-202ENST00000409292 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 FOCADQ5VW36 1801 aa9.32□□□□□ -0.92
LSM5-202ENST00000409292 SIPA1L1O43166 1804 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 MOXD2PA6NHM9 499 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 PQBP1O60828 265 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 PDE6AP16499 860 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 STAT3P40763 770 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 FAM47AQ5JRC9 791 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 C9orf50Q5SZB4 431 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 ZSCAN25Q6NSZ9 544 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 MSL3Q8N5Y2 521 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 TRPV1Q8NER1 839 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 ATG4CQ96DT6 458 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 GLT1D1Q96MS3 346 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 DNAJC2Q99543 621 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 TINF2Q9BSI4 451 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 TSEN34Q9BSV6 310 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 KANSL2Q9H9L4 492 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 CDHR5Q9HBB8 845 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 TLR7Q9NYK1 1049 aaKnown RBP9.31□□□□□ -0.92
LSM5-202ENST00000409292 FAM184BQ9ULE4 1060 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
LSM5-202ENST00000409292 GOLIM4O00461 696 aa9.3□□□□□ -0.92
LSM5-202ENST00000409292 KIAA0355O15063 1070 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms