RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 LRRIQ4A6NIV6 560 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 UBASH3AP57075 661 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 RAPGEF1Q13905 1077 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 TSC1Q92574 1164 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 STAMQ92783 540 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
KDM3A-202ENST00000409064 KRT5P13647 590 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 GYS1P13807 737 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 ERCC3P19447 782 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 POLGP54098 1239 aaPredicted RBP11.26□□□□□ -0.61
KDM3A-202ENST00000409064 AXDND1Q5T1B0 1012 aaPredicted RBP11.26□□□□□ -0.61
KDM3A-202ENST00000409064 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 SYDE2Q5VT97 1194 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 FAM160B1Q5W0V3 765 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 RDH13Q8NBN7 331 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 TEKT3Q9BXF9 490 aa11.26□□□□□ -0.61
KDM3A-202ENST00000409064 TRMT1Q9NXH9 659 aaKnown RBP11.26□□□□□ -0.61
KDM3A-202ENST00000409064 KIF5CO60282 957 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 GCNT3O95395 438 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 EPB41P11171 864 aaKnown RBP11.25□□□□□ -0.61
KDM3A-202ENST00000409064 VEGFAP15692 232 aaPredicted RBP11.25□□□□□ -0.61
KDM3A-202ENST00000409064 IQCEQ6IPM2 695 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 FAM160B2Q86V87 743 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 RNF34Q969K3 372 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 MRPL44Q9H9J2 332 aaKnown RBP11.25□□□□□ -0.61
KDM3A-202ENST00000409064 KCNG1Q9UIX4 513 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 LRFN2Q9ULH4 789 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 CNTNAP4Q9C0A0 1308 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 POLR2DO15514 142 aaKnown RBP11.25□□□□□ -0.61
KDM3A-202ENST00000409064 STX10O60499 249 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 CD19P15391 556 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
KDM3A-202ENST00000409064 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 AKT3Q9Y243 479 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 PLEKHG2Q9H7P9 1386 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 GOLGA6L10A6NI86 522 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 CPDO75976 1380 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 DDAH1O94760 285 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 PAFAH1B1P43034 410 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 SNAP25P60880 206 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 FRMPD1Q5SYB0 1578 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 CABP7Q86V35 215 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 IFT172Q9UG01 1749 aa11.25□□□□□ -0.61
KDM3A-202ENST00000409064 M0R2C6 588 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 PSMD14O00487 310 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 CETN3O15182 167 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 CYP2D6P10635 497 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 LMAN1P49257 510 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
KDM3A-202ENST00000409064 ME3Q16798 604 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 CLSTN2Q9H4D0 955 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 CBX8Q9HC52 389 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 KCNH3Q9ULD8 1083 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 AK9Q5TCS8 1911 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 PIK3C2BO00750 1634 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 ZSCAN12O43309 604 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 SKILP12757 684 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 TECP42680 631 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 HMGCS2P54868 508 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 STYK1Q6J9G0 422 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
KDM3A-202ENST00000409064 PIGSQ96S52 555 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 ZBTB24O43167 697 aaPredicted RBP11.24□□□□□ -0.61
KDM3A-202ENST00000409064 TNNI1P19237 187 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 NFX1Q12986 1120 aaKnown RBP11.24□□□□□ -0.61
KDM3A-202ENST00000409064 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
KDM3A-202ENST00000409064 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 CTAGE1Q96RT6 745 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 NUB1Q9Y5A7 615 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 ZNF75DP51815 510 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
KDM3A-202ENST00000409064 INO80B-WBP1J3KQ70 363 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 ABL1P00519 1130 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 SCARF1Q14162 830 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
KDM3A-202ENST00000409064 FASTKD5Q7L8L6 764 aaKnown RBP11.23□□□□□ -0.61
KDM3A-202ENST00000409064 CDHR1Q96JP9 859 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 RPS6KC1Q96S38 1066 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 INO80BQ9C086 356 aaPredicted RBP11.23□□□□□ -0.61
KDM3A-202ENST00000409064 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 DDX25Q9UHL0 483 aaKnown RBP11.23□□□□□ -0.61
KDM3A-202ENST00000409064 MED23Q9ULK4 1368 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 CNNM4Q6P4Q7 775 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
KDM3A-202ENST00000409064 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
KDM3A-202ENST00000409064 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms