RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 AHI1Q8N157 1196 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 PPM1KQ8N3J5 372 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 VWCEQ96DN2 955 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 FAM46AQ96IP4 442 aaKnown RBP6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 MRGPRX3Q96LB0 322 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 CGGBP1Q9UFW8 167 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 SHOXO15266 292 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 KCNQ2O43526 872 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 SLITRK5O94991 958 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 RAPGEF3O95398 923 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 CPP00450 1065 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 S100BP04271 92 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 NFICP08651 508 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 NAT1P18440 290 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 HOXC12P31275 282 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 KIR3DL1P43629 444 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 MAP4K2Q12851 820 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 GRIK4Q16099 956 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 TRIM61Q5EBN2 209 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 CDH24Q86UP0 819 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 THNSL2Q86YJ6 484 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 RPUSD2Q8IZ73 545 aaKnown RBP6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 ADCY4Q8NFM4 1077 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 MYRFLQ96LU7 910 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 IER2Q9BTL4 223 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 DSCC1Q9BVC3 393 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 HOMER2Q9NSB8 354 aa6.55□□□□□ -1.36
HMGB3P18-201ENST00000406327 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 FAM95CA0A1B0GW59 222 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 ALG1L2C9J202 215 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 MARCH6O60337 910 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 ALX3O95076 343 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 PMLP29590 882 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 FLT3P36888 993 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 ZNF445P59923 1031 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 C21orf62-AS1Q17RA5 79 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 YOD1Q5VVQ6 348 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 MAMDC2Q7Z304 686 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 FIBCD1Q8N539 461 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 PRPF38AQ8NAV1 312 aaKnown RBP6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 FBLIM1Q8WUP2 373 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 WFDC12Q8WWY7 111 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 IRF2BPLQ9H1B7 796 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 NOL6Q9H6R4 1146 aaKnown RBP6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 PRDM5Q9NQX1 630 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 ATP8A1Q9Y2Q0 1164 aa6.54□□□□□ -1.36
HMGB3P18-201ENST00000406327 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 A0A087X0B3 334 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 KCNH1O95259 989 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 NPTXRO95502 500 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 CAPNS1P04632 268 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 PDGFRBP09619 1106 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 BMP3P12645 472 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 ITIH2P19823 946 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 MAP4P27816 1152 aaKnown RBP6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 KCNJ6P48051 423 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 AMPD2Q01433 879 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 PLEKHG6Q3KR16 790 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 SGO2Q562F6 1265 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 NKAPLQ5M9Q1 402 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 CCDC181Q5TID7 509 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 CWF19L1Q69YN2 538 aaKnown RBP6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 GTF2IRD2BQ6EKJ0 949 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 GTF2IRD2Q86UP8 949 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 FERMT3Q86UX7 667 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 LRRTM3Q86VH5 581 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 TOP6BLQ8N6T0 577 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 PTPRN2Q92932 1015 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 OSBP2Q969R2 916 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 NKX2-4Q9H2Z4 354 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 NDOR1Q9UHB4 597 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 GTF2IRD1Q9UHL9 959 aa6.53□□□□□ -1.36
HMGB3P18-201ENST00000406327 GSG1L2A8MUP6 293 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 B4E1Z4 1266 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 DHX15O43143 795 aaKnown RBP6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 SIGLEC6O43699 453 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 ASLP04424 464 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 SNRPB2P08579 225 aaKnown RBP6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 NOS3P29474 1203 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 GFRA1P56159 465 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 RBM10P98175 930 aaKnown RBP6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 NFKB2Q00653 900 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 POU4F1Q01851 419 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 PPP2R5DQ14738 602 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 SFRP5Q5T4F7 317 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 FAM20CQ8IXL6 584 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 ENOX1Q8TC92 643 aaKnown RBP6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 PCGF6Q9BYE7 350 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 PRDM14Q9GZV8 571 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 GOLGA2P5Q9HBQ8 144 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 CYP26B1Q9NR63 512 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms