RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MCM5P33992 734 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-204ENST00000405578 BACE1P56817 501 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 JAG1P78504 1218 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 CCL14Q16627 93 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 C9orf50Q5SZB4 431 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 CEP95Q96GE4 821 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 SENP6Q9GZR1 1112 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-204ENST00000405578 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 TCP11L1Q9NUJ3 509 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 NYAP2Q9P242 653 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 SYNPO2Q9UMS6 1093 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 SIPA1L1O43166 1804 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 PLIN4Q96Q06 1357 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 MUC3AQ02505 3323 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 NCOR1O75376 2440 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
RPAIN-204ENST00000405578 PLA2G5P39877 138 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 ANAPC15P60006 121 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-204ENST00000405578 MTMR2Q13614 643 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-204ENST00000405578 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 TRMT44Q8IYL2 757 aaKnown RBP12.37□□□□□ -0.43
RPAIN-204ENST00000405578 TTC14Q96N46 770 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 ZSCAN10Q96SZ4 725 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-204ENST00000405578 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
RPAIN-204ENST00000405578 KIAA1683Q9H0B3 1180 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 CLIP2Q9UDT6 1046 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 MYO9BQ13459 2157 aa12.37□□□□□ -0.43
RPAIN-204ENST00000405578 CDK5RAP2Q96SN8 1893 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 TMEM265A0A087WTH1 108 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 IGKV6D-41A0A0C4DH26 115 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
RPAIN-204ENST00000405578 RAD21O60216 631 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 RTP1P59025 263 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 FGD1P98174 961 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 DGKHQ86XP1 1220 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 USP38Q8NB14 1042 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 LPAR1Q92633 364 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 KCNB2Q92953 911 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 TXNRD2Q9NNW7 524 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
RPAIN-204ENST00000405578 MYH1P12882 1939 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 TOP1P11387 765 aaKnown RBP12.35□□□□□ -0.43
RPAIN-204ENST00000405578 RGS2P41220 211 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 SMAD3P84022 425 aaKnown RBP12.35□□□□□ -0.43
RPAIN-204ENST00000405578 ZYXQ15942 572 aaKnown RBP12.35□□□□□ -0.43
RPAIN-204ENST00000405578 TMEM67Q5HYA8 995 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 IFIT1BQ5T764 474 aaKnown RBP12.35□□□□□ -0.43
RPAIN-204ENST00000405578 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
RPAIN-204ENST00000405578 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 TMTC2Q8N394 836 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 GPRC5AQ8NFJ5 357 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 ACER1Q8TDN7 264 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 USP6NLQ92738 828 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 MKL1Q969V6 931 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 FAM122AQ96E09 287 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 TMEM87BQ96K49 555 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
RPAIN-204ENST00000405578 APBA2Q99767 749 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 KAT14Q9H8E8 782 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 TNKSO95271 1327 aa12.35□□□□□ -0.43
RPAIN-204ENST00000405578 PRC1O43663 620 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 NMT2O60551 498 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 SEC24BO95487 1268 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 MAPK4P31152 587 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 HERVK_113P62684 666 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 WTAPQ15007 396 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 MORN1Q5T089 497 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 CLEC10AQ8IUN9 316 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
RPAIN-204ENST00000405578 MB21D2Q8IYB1 491 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-204ENST00000405578 C12orf42Q96LP6 360 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
RPAIN-204ENST00000405578 ZKSCAN3Q9BRR0 538 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 PORCNQ9H237 461 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 PRDM5Q9NQX1 630 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-204ENST00000405578 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
RPAIN-204ENST00000405578 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
RPAIN-204ENST00000405578 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms