RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ANKZF1Q9H8Y5 726 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 ABHD10Q9NUJ1 306 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 RNF216Q9NWF9 866 aaPredicted RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 REXO2Q9Y3B8 237 aaKnown RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 ADAMTSL1Q8N6G6 1762 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 H7C1D1 291 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 CYTH3O43739 400 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 EDIL3O43854 480 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 RPN1P04843 607 aaKnown RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 HIBADHP31937 336 aaKnown RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 TXLNAP40222 546 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 COPB1P53618 953 aaKnown RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 CDK17Q00537 523 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 SPAG1Q07617 926 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 JAKMIP3Q5VZ66 844 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 ZSCAN29Q8IWY8 852 aaPredicted RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 IGSF22Q8N9C0 903 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 GIMAP8Q8ND71 665 aaPredicted RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 CCDC34Q96HJ3 373 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 PURBQ96QR8 312 aaKnown RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 SPZ1Q9BXG8 430 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 FUT8Q9BYC5 575 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 ZMYND12Q9H0C1 365 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 CUEDC2Q9H467 287 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 THAP9Q9H5L6 903 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 BRMS1Q9HCU9 246 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 DISC1Q9NRI5 854 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 RMND1Q9NWS8 449 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 TTF2Q9UNY4 1162 aaKnown RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 A0A0U1RQJ8 604 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 KCNQ2O43526 872 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 CYP2D6P10635 497 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 CASP1P29466 404 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 CYP2C19P33261 490 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 PPP2R3AQ06190 1150 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 BRD3Q15059 726 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 SRGAP1Q7Z6B7 1085 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 ATRIPQ8WXE1 791 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 FAM163AQ96GL9 167 aaPredicted RBP4.37□□□□□ -1.71
RTN4-209ENST00000405240 C7orf25Q9BPX7 421 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 LZTS2Q9BRK4 669 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 BARHL2Q9NY43 387 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 CDC23Q9UJX2 597 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 PSME4Q14997 1843 aa4.37□□□□□ -1.71
RTN4-209ENST00000405240 A0A1W2PQJ5 194 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 EEF1GP26641 437 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 CASP14P31944 242 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 KIF5BP33176 963 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 PRCPP42785 496 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 AKAP17AQ02040 695 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 PAK1Q13153 545 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 FIGNQ5HY92 759 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 SPTY2D1Q68D10 685 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 TTI2Q6NXR4 508 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 WDR59Q6PJI9 974 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ZNF572Q7Z3I7 529 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 TXNRD3Q86VQ6 643 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CERS3Q8IU89 383 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CERKQ8TCT0 537 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 NOC3LQ8WTT2 800 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 UBXN4Q92575 508 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 AK8Q96MA6 479 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 DUSP9Q99956 384 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 PARD6BQ9BYG5 372 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 CAPN11Q9UMQ6 739 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ESYT2A0FGR8 921 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CCDC151A5D8V7 595 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 KCNJ18B7U540 433 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 PSMD14O00487 310 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 LCA5LO95447 670 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 IL1R1P14778 569 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CDK11BP21127 795 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 PRDX5P30044 214 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 HNRNPH3P31942 346 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 AFMP43652 599 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 GNAQP50148 359 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 KCNJ12Q14500 433 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 VPS72Q15906 364 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 WWC2Q6AWC2 1192 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 PIK3AP1Q6ZUJ8 805 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 C16orf86Q6ZW13 317 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 HOMER1Q86YM7 354 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CCDC82Q8N4S0 544 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 PDILTQ8N807 584 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CTCFLQ8NI51 663 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 NELFBQ8WX92 580 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ACSBG1Q96GR2 724 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 RTFDC1Q9BY42 306 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 PSD3Q9NYI0 1048 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ABCF2Q9UG63 623 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CTNND2Q9UQB3 1225 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 LEMD3Q9Y2U8 911 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ABCB11O95342 1321 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 IGKV6D-41A0A0C4DH26 115 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 hCG_1642624A0A1W2PR95 340 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 LGALS16A8MUM7 142 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 URI1O94763 535 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 SRGNP10124 158 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 PMS1P54277 932 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms