RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 PRC1O43663 620 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 SNHG28P0DPA3 235 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 MAPK4P31152 587 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 MCM5P33992 734 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 WTAPQ15007 396 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 SART3Q15020 963 aaKnown RBP17.09■□□□□ 0.33
CDPF1-203ENST00000404583 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 WDR78Q5VTH9 848 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 KCNB2Q92953 911 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 HTTP42858 3142 aa17.09■□□□□ 0.33
CDPF1-203ENST00000404583 PLA2G6O60733 806 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 ZBED4O75132 1171 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 SLC16A2P36021 539 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 FLT3LGP49771 235 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 PRMT2P55345 433 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 ZNF543Q08ER8 600 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 GPHNQ9NQX3 736 aaPredicted RBP17.08■□□□□ 0.32
CDPF1-203ENST00000404583 GJD2Q9UKL4 321 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.32
CDPF1-203ENST00000404583 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.32
CDPF1-203ENST00000404583 ZNFX1Q9P2E3 1918 aaKnown RBP17.07■□□□□ 0.32
CDPF1-203ENST00000404583 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
CDPF1-203ENST00000404583 GOLGA8HP0CJ92 632 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 ERCC3P19447 782 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 STAT3P40763 770 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 SNAP25P60880 206 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 KRT32Q14532 448 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 RAET1EQ8TD07 263 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
CDPF1-203ENST00000404583 RAVER2Q9HCJ3 691 aaKnown RBP17.07■□□□□ 0.32
CDPF1-203ENST00000404583 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
CDPF1-203ENST00000404583 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
CDPF1-203ENST00000404583 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
CDPF1-203ENST00000404583 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
CDPF1-203ENST00000404583 NCAPG2Q86XI2 1143 aa17.06■□□□□ 0.32
CDPF1-203ENST00000404583 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
CDPF1-203ENST00000404583 LY9Q9HBG7 655 aa17.06■□□□□ 0.32
CDPF1-203ENST00000404583 SLC4A3P48751 1232 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
CDPF1-203ENST00000404583 SYDE2Q5VT97 1194 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 RIOX2Q8IUF8 465 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 SHCBP1Q8NEM2 672 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 BRCA2P51587 3418 aa17.05■□□□□ 0.32
CDPF1-203ENST00000404583 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-203ENST00000404583 ATP2A1O14983 1001 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 SEC24BO95487 1268 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 SLC25A27O95847 323 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
CDPF1-203ENST00000404583 FDX1P10109 184 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 CPA1P15085 419 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 CYP2B6P20813 491 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 PTPREP23469 700 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
CDPF1-203ENST00000404583 MORN1Q5T089 497 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
CDPF1-203ENST00000404583 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
CDPF1-203ENST00000404583 STAG2Q8N3U4 1231 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 JAKMIP1Q96N16 626 aaKnown RBP17.04■□□□□ 0.32
CDPF1-203ENST00000404583 NUDT12Q9BQG2 462 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 MROH8Q9H579 483 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 RIPK3Q9Y572 518 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 IVNS1ABPQ9Y6Y0 642 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 PDE4DIPQ5VU43 2346 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 ZNF536O15090 1300 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 IRF5Q13568 498 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 SLC9C1Q4G0N8 1177 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 SH3TC2Q8TF17 1288 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 USP6NLQ92738 828 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
CDPF1-203ENST00000404583 BAZ2BQ9UIF8 2168 aaKnown RBP17.03■□□□□ 0.32
CDPF1-203ENST00000404583 SLC15A5A6NIM6 579 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 ADCY3O60266 1144 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
CDPF1-203ENST00000404583 ELNP15502 786 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 GRK4P32298 578 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 LIFRP42702 1097 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 OAZ1P54368 228 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 TROAPQ12815 778 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 NFXL1Q6ZNB6 911 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 CATIPQ7Z7H3 387 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 MYL10Q9BUA6 226 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
CDPF1-203ENST00000404583 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
CDPF1-203ENST00000404583 MYH6P13533 1939 aa17.02■□□□□ 0.32
CDPF1-203ENST00000404583 CCDC69A6NI79 296 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms