RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 EEF1GP26641 437 aaKnown RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 UBXN1Q04323 297 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 STIM1Q13586 685 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 DTHD1Q6ZMT9 781 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 TXLNBQ8N3L3 684 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 ARHGAP25P42331 645 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 BEND6Q5SZJ8 279 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 SPTY2D1Q68D10 685 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 DAGLBQ8NCG7 672 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 OR8K1Q8NGG5 319 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 PUF60Q9UHX1 559 aaKnown RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 ERICH4A6NGS2 130 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 M0R2N6 131 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 HDXQ7Z353 690 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 NOC3LQ8WTT2 800 aaKnown RBP12.08□□□□□ -0.48
CLIP4-204ENST00000404424 CCSER1Q9C0I3 900 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 HAUS4Q9H6D7 363 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 GDAQ9Y2T3 454 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 EPN1Q9Y6I3 576 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-204ENST00000404424 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 RHOBTB3O94955 611 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 NDUFA10O95299 355 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 VEGFAP15692 232 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-204ENST00000404424 PRPHP41219 470 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
CLIP4-204ENST00000404424 MB21D1Q8N884 522 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 NYXQ9GZU5 481 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 CUEDC2Q9H467 287 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.48
CLIP4-204ENST00000404424 LUC7L2Q9Y383 392 aaKnown RBP12.08□□□□□ -0.48
CLIP4-204ENST00000404424 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 MYH8P13535 1937 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 FAM205AQ6ZU69 1335 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
CLIP4-204ENST00000404424 PSMA7O14818 248 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 COBLO75128 1261 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 EIF3JO75822 258 aaKnown RBP12.07□□□□□ -0.48
CLIP4-204ENST00000404424 PRDX5P30044 214 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 CDC25AP30304 524 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 GRM4Q14833 912 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 ZNF662Q6ZS27 426 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 IRF2BP1Q8IU81 584 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 DNAJC7Q99615 494 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 TCP11L1Q9NUJ3 509 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 KBTBD4Q9NVX7 518 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 MYO6Q9UM54 1294 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 CAPN11Q9UMQ6 739 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 MYH13Q9UKX3 1938 aa12.07□□□□□ -0.48
CLIP4-204ENST00000404424 CYP2D6P10635 497 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 UBA7P41226 1012 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 DNM2P50570 870 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 AMPD2Q01433 879 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 TFAP4Q01664 338 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 EVX2Q03828 476 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 GIMAP8Q8ND71 665 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-204ENST00000404424 ZNF507Q8TCN5 953 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 EXOC4Q96A65 974 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 MAGEC2Q9UBF1 373 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-204ENST00000404424 L1RE1Q9UN81 338 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-204ENST00000404424 TTC26A0AVF1 554 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 ADAMTS3O15072 1205 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 KLRC4O43908 158 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 PPP1R2P41236 205 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 RASSF8Q8NHQ8 419 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 DHTKD1Q96HY7 919 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-204ENST00000404424 AK8Q96MA6 479 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 NUP58Q9BVL2 599 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 ZNF831Q5JPB2 1677 aa12.06□□□□□ -0.48
CLIP4-204ENST00000404424 PSMD14O00487 310 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 KLRK1P26718 216 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 KRT83P78385 493 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms