RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 PRPF38AQ8NAV1 312 aaKnown RBP14.32□□□□□ -0.12
LINC00339-201ENST00000404210 BRI3BPQ8WY22 251 aa14.32□□□□□ -0.12
LINC00339-201ENST00000404210 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
LINC00339-201ENST00000404210 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
LINC00339-201ENST00000404210 UBA5Q9GZZ9 404 aa14.32□□□□□ -0.12
LINC00339-201ENST00000404210 RIOX1Q9H6W3 641 aa14.32□□□□□ -0.12
LINC00339-201ENST00000404210 HOXC10Q9NYD6 342 aa14.32□□□□□ -0.12
LINC00339-201ENST00000404210 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
LINC00339-201ENST00000404210 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 CPLX1O14810 134 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 FDX1P10109 184 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 IFNAR1P17181 557 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 OSBPP22059 807 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 DSG3P32926 999 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 ANP32AP39687 249 aaKnown RBP14.31□□□□□ -0.12
LINC00339-201ENST00000404210 STAT2P52630 851 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 KIF23Q02241 960 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-201ENST00000404210 SREBF2Q12772 1141 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 RASGRP2Q7LDG7 609 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 PTPN18Q99952 460 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 NCOA5Q9HCD5 579 aaKnown RBP14.31□□□□□ -0.12
LINC00339-201ENST00000404210 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
LINC00339-201ENST00000404210 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
LINC00339-201ENST00000404210 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
LINC00339-201ENST00000404210 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
LINC00339-201ENST00000404210 FLOT1O75955 427 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 CDKL5O76039 1030 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 PLEKHA8P1O95397 391 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 MAP2K2P36507 400 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 FUT2Q10981 343 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 ST3GAL1Q11201 340 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 ADGRF4Q8IZF3 695 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
LINC00339-201ENST00000404210 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
LINC00339-201ENST00000404210 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
LINC00339-201ENST00000404210 PDHXO00330 501 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 CYTH3O43739 400 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 CTDNEP1O95476 244 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 SLC16A2P36021 539 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 VEGFBP49765 207 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 SSRP1Q08945 709 aaKnown RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 IKQ13123 557 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 SYDE2Q5VT97 1194 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 NSUN7Q8NE18 718 aaKnown RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 MTMR8Q96EF0 704 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 JMJD4Q9H9V9 463 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 FBXO28Q9NVF7 368 aa14.29□□□□□ -0.12
LINC00339-201ENST00000404210 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-201ENST00000404210 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-201ENST00000404210 HTRA3P83110 453 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 RLFQ13129 1914 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 GRM1Q13255 1194 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 SMARCC2Q8TAQ2 1214 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 GTF3C2Q8WUA4 911 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-201ENST00000404210 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
LINC00339-201ENST00000404210 ZIC5Q96T25 663 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
LINC00339-201ENST00000404210 RBM27Q9P2N5 1060 aaKnown RBP14.28□□□□□ -0.12
LINC00339-201ENST00000404210 V9GY48 417 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-201ENST00000404210 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.12
LINC00339-201ENST00000404210 PARP14Q460N5 1801 aa14.27□□□□□ -0.12
LINC00339-201ENST00000404210 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
LINC00339-201ENST00000404210 AOC2O75106 756 aa14.27□□□□□ -0.13
LINC00339-201ENST00000404210 ZBED4O75132 1171 aa14.27□□□□□ -0.13
LINC00339-201ENST00000404210 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.13
LINC00339-201ENST00000404210 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
LINC00339-201ENST00000404210 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
LINC00339-201ENST00000404210 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
LINC00339-201ENST00000404210 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
LINC00339-201ENST00000404210 STK36Q9NRP7 1315 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
LINC00339-201ENST00000404210 IGF2BP3O00425 579 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00339-201ENST00000404210 VWA5AO00534 786 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 ZBTB5O15062 677 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 ALDH1A1P00352 501 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 HERVK_113P62684 666 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 MB21D1Q8N884 522 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 PHKBQ93100 1093 aa14.26□□□□□ -0.13
LINC00339-201ENST00000404210 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms