RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ZNF131P52739 623 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 RPS6KA2Q15349 733 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 MYO1AQ9UBC5 1043 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 STAM2O75886 525 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 CCDC122Q5T0U0 273 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 NBPF11Q86T75 865 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 IFT81Q8WYA0 676 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 FAM8A1Q9UBU6 413 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 KCNG1Q9UIX4 513 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 NDUFB9Q9Y6M9 179 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 SAT1P21673 171 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 IQCA1LA6NCM1 817 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 SDSP20132 328 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 MARK3P27448 753 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 TSC22D1Q15714 1073 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 XAGE2Q96GT9 111 aa12.06□□□□□ -0.48
CACNA1C-216ENST00000399638 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 ARL4DP49703 201 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 KCNQ4P56696 695 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 ASIC2Q16515 512 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 DYMQ7RTS9 669 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 MYLK4Q86YV6 388 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 RTKN2Q8IZC4 609 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 GPR161Q8N6U8 529 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 ZFYVE1Q9HBF4 777 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 ZSCAN32Q9NX65 697 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 FOSL2P15408 326 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 EPHB1P54762 984 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 DSTYKQ6XUX3 929 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 VCXQ9H320 206 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 DISC1Q9NRI5 854 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 MTRF1LQ9UGC7 380 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 TRPM2O94759 1503 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 PDE1AP54750 535 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 SPAG1Q07617 926 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 BTDP43251 543 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 MIS18BP1Q6P0N0 1132 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 CC2D1AQ6P1N0 951 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 SCYL1Q96KG9 808 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 DDX41Q9UJV9 622 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 CCND2P30279 289 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 MAP7Q14244 749 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 PRPSAP1Q14558 356 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 GPIHBP1Q8IV16 184 aa12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 FAM49AQ9H0Q0 323 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-216ENST00000399638 PCK1P35558 622 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 GIMAP6Q6P9H5 292 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 PDZD4Q76G19 769 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 NELFCDQ8IXH7 590 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 KDM5BQ9UGL1 1544 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 ARHGEF37A1IGU5 675 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 GSTA1P08263 222 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 GSTA2P09210 222 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 ANO6Q4KMQ2 910 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 NUDT18Q6ZVK8 323 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 AFF2P51816 1311 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 FLT4P35916 1363 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 INO80B-WBP1J3KQ70 363 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 DMP1Q13316 513 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 SPATA5Q8NB90 893 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 KDRP35968 1356 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 PLCD1P51178 756 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 TFAP4Q01664 338 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 MROH5Q6ZUA9 1318 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 CCDC85CA6NKD9 419 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 ARHGAP44Q17R89 818 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
CACNA1C-216ENST00000399638 CYP2J2P51589 502 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 TTC25Q96NG3 672 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 K7ENM7 598 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 TBC1D12O60347 775 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 GNAT1P11488 350 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 TIMM10P62072 90 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 C7orf31Q8N865 590 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 LPIN2Q92539 896 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms