RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 MAP3K12Q12852 859 aa12.29□□□□□ -0.44
ITSN1-207ENST00000399338 CAGE1Q8TC20 777 aa12.29□□□□□ -0.44
ITSN1-207ENST00000399338 TRIM37O94972 964 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 KIF5BP33176 963 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 CFAP58Q5T655 872 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 CCDC43Q96MW1 224 aaKnown RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 HAUS4Q9H6D7 363 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 PAEPP09466 180 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 MRPS35P82673 323 aaKnown RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ERICH1Q86X53 443 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 MREGQ8N565 214 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ARFGAP2Q8N6H7 521 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ABHD10Q9NUJ1 306 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ADD3Q9UEY8 706 aaKnown RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 MAPK8IP1Q9UQF2 711 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ITIH6Q6UXX5 1313 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 TPD52L2O43399 206 aaKnown RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 EVI5O60447 810 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 GKAP1Q5VSY0 366 aaPredicted RBP12.28□□□□□ -0.44
ITSN1-207ENST00000399338 ANO1Q5XXA6 986 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 SHC4Q6S5L8 630 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 TMTC2Q8N394 836 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 SYT15Q9BQS2 421 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 MAN1B1Q9UKM7 699 aa12.28□□□□□ -0.44
ITSN1-207ENST00000399338 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.44
ITSN1-207ENST00000399338 PSMC4P43686 418 aa12.27□□□□□ -0.44
ITSN1-207ENST00000399338 TBC1D1Q86TI0 1168 aaPredicted RBP12.27□□□□□ -0.44
ITSN1-207ENST00000399338 SPICE1Q8N0Z3 855 aa12.27□□□□□ -0.44
ITSN1-207ENST00000399338 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.44
ITSN1-207ENST00000399338 OCEL1Q9H607 264 aa12.27□□□□□ -0.44
ITSN1-207ENST00000399338 STIM2Q9P246 746 aa12.27□□□□□ -0.44
ITSN1-207ENST00000399338 EIF4E1BA6NMX2 242 aaKnown RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 PENKP01210 267 aaPredicted RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 FDPSP14324 419 aaKnown RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 ZNF24P17028 368 aa12.27□□□□□ -0.45
ITSN1-207ENST00000399338 MPP3Q13368 585 aa12.27□□□□□ -0.45
ITSN1-207ENST00000399338 TAF11Q15544 211 aa12.27□□□□□ -0.45
ITSN1-207ENST00000399338 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
ITSN1-207ENST00000399338 SFMBT2Q5VUG0 894 aa12.27□□□□□ -0.45
ITSN1-207ENST00000399338 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 ELOA2Q8IYF1 753 aaPredicted RBP12.27□□□□□ -0.45
ITSN1-207ENST00000399338 ARHGEF10LQ9HCE6 1279 aa12.27□□□□□ -0.45
ITSN1-207ENST00000399338 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 F8W031 263 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 DRD4P21917 467 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 SLC7A5Q01650 507 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 KIAA0753Q2KHM9 967 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 ZNF662Q6ZS27 426 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 CREG2Q8IUH2 290 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 IFT43Q96FT9 208 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 TMBIM4Q9HC24 238 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 NDUFA10O95299 355 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 EIF4BP23588 611 aaKnown RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 PAK2Q13177 524 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 SLC39A14Q15043 492 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 CDC37Q16543 378 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 CMPK2Q5EBM0 449 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 HAUS3Q68CZ6 603 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 LRRC42Q9Y546 428 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 RNF225M0QZC1 329 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 TAF5LO75529 589 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 ATP2A2P16615 1042 aaKnown RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 POLD1P28340 1107 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 FLIIQ13045 1269 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 IFI16Q16666 785 aaKnown RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 AKNAD1Q5T1N1 836 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 LRRC2Q9BYS8 371 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 AATFQ9NY61 560 aaKnown RBP eCLIP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 ATXN10Q9UBB4 475 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 DACH1Q9UI36 760 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 CEP131Q9UPN4 1083 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 EPN1Q9Y6I3 576 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-207ENST00000399338 PXDNLA1KZ92 1463 aa12.26□□□□□ -0.45
ITSN1-207ENST00000399338 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
ITSN1-207ENST00000399338 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
ITSN1-207ENST00000399338 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
ITSN1-207ENST00000399338 RESP18Q5W5W9 173 aa12.25□□□□□ -0.45
ITSN1-207ENST00000399338 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-207ENST00000399338 PREBQ9HCU5 417 aa12.25□□□□□ -0.45
ITSN1-207ENST00000399338 GALNT8Q9NY28 637 aa12.25□□□□□ -0.45
ITSN1-207ENST00000399338 CRB1P82279 1406 aa12.25□□□□□ -0.45
ITSN1-207ENST00000399338 LAMA4Q16363 1823 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms