RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 USP17L2Q6R6M4 530 aa10.81□□□□□ -0.68
LINC00243-201ENST00000399196 USP49Q70CQ1 688 aa10.81□□□□□ -0.68
LINC00243-201ENST00000399196 MTMR14Q8NCE2 650 aa10.81□□□□□ -0.68
LINC00243-201ENST00000399196 FAM151AQ8WW52 585 aa10.81□□□□□ -0.68
LINC00243-201ENST00000399196 MYH4Q9Y623 1939 aa10.81□□□□□ -0.68
LINC00243-201ENST00000399196 IGKV6D-41A0A0C4DH26 115 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 ESPNB1AK53 854 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 PTPREP23469 700 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 MMP14P50281 582 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 IQCB1Q15051 598 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
LINC00243-201ENST00000399196 TMCO4Q5TGY1 634 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 SASS6Q6UVJ0 657 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC00243-201ENST00000399196 COL2A1P02458 1487 aaPredicted RBP10.8□□□□□ -0.68
LINC00243-201ENST00000399196 USP17L5A8MUK1 530 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 WNT10BO00744 389 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 CTAGE5O15320 804 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 ZNF165P49910 485 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 NLRP5P59047 1200 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 ABCB5Q2M3G0 1257 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 FKBP1CQ5VVH2 108 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 WWC2Q6AWC2 1192 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 TATDN1Q6P1N9 297 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 RASGRP4Q8TDF6 673 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 TRIM44Q96DX7 344 aaPredicted RBP10.8□□□□□ -0.68
LINC00243-201ENST00000399196 KANSL2Q9H9L4 492 aa10.8□□□□□ -0.68
LINC00243-201ENST00000399196 HERC5Q9UII4 1024 aaKnown RBP10.8□□□□□ -0.68
LINC00243-201ENST00000399196 M0R2N6 131 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 FOXN1O15353 648 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 CUTAO60888 179 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 GDF11O95390 407 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 EGFRP00533 1210 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 PDHBP11177 359 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 TNNI2P48788 182 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 GMPSP49915 693 aaPredicted RBP10.79□□□□□ -0.68
LINC00243-201ENST00000399196 NBPF9Q3BBW0 867 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 LONRF3Q496Y0 759 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 ASPRV1Q53RT3 343 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 TMEM179Q6ZVK1 233 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
LINC00243-201ENST00000399196 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
LINC00243-201ENST00000399196 SDF4Q9BRK5 362 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 KIAA1468Q9P260 1216 aa10.79□□□□□ -0.68
LINC00243-201ENST00000399196 SEC63Q9UGP8 760 aaKnown RBP10.79□□□□□ -0.68
LINC00243-201ENST00000399196 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 GRIN3BO60391 1043 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 SYKP43405 635 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 ICA1Q05084 483 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 CCDC96Q2M329 555 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 HEATR3Q7Z4Q2 680 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 METTL16Q86W50 562 aaKnown RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 HOMER1Q86YM7 354 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 JMYQ8N9B5 988 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 TRAIPQ9BWF2 469 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 SPZ1Q9BXG8 430 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 TMEM39BQ9GZU3 492 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 A0A087X0B3 334 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 STXBP3O00186 592 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 EEF2P13639 858 aaKnown RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 CALML3P27482 149 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 ZNF280AP59817 542 aaPredicted RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 TNFAIP1Q13829 316 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 SEPT2Q15019 361 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 ZNF174Q15697 407 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 DPCR1Q3MIW9 517 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 PIK3AP1Q6ZUJ8 805 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 FAM83AQ86UY5 434 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 CCDC148Q8NFR7 591 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 DPF2Q92785 391 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 UBA5Q9GZZ9 404 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 CSRNP2Q9H175 543 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 GPCPD1Q9NPB8 672 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
LINC00243-201ENST00000399196 CNOT7Q9UIV1 285 aaKnown RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 SRPRBQ9Y5M8 271 aaKnown RBP10.78□□□□□ -0.68
LINC00243-201ENST00000399196 CNTNAP1P78357 1384 aa10.77□□□□□ -0.68
LINC00243-201ENST00000399196 TRIM75PA6NK02 468 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 BIN1O00499 593 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 DDNO94850 711 aaPredicted RBP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 GH2P01242 217 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 SMARCA1P28370 1054 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 PNOCQ13519 176 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 STX1AQ16623 288 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 DHX40Q8IX18 779 aaKnown RBP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 ZBED3Q96IU2 234 aaPredicted RBP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 NYAP2Q9P242 653 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 BCCIPQ9P287 314 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 KCNH3Q9ULD8 1083 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 SNHG28P0DPA3 235 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 JAG1P78504 1218 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 IL17AQ16552 155 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 TBC1D10BQ4KMP7 808 aaPredicted RBP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 GPATCH4Q5T3I0 446 aaKnown RBP10.77□□□□□ -0.69
LINC00243-201ENST00000399196 ISM2Q6H9L7 571 aa10.77□□□□□ -0.69
LINC00243-201ENST00000399196 SAMD7Q7Z3H4 446 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms