RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 IL17AQ16552 155 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 USP40Q9NVE5 1235 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 PARP1P09874 1014 aaKnown RBP13.38□□□□□ -0.27
COL25A1-202ENST00000399127 CACNB3P54284 484 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
COL25A1-202ENST00000399127 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 DPF2Q92785 391 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
COL25A1-202ENST00000399127 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 STXBP3O00186 592 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 SERPINC1P01008 464 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 AKR1B1P15121 316 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 FMR1Q06787 632 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL25A1-202ENST00000399127 INF2Q27J81 1249 aa13.38□□□□□ -0.27
COL25A1-202ENST00000399127 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
COL25A1-202ENST00000399127 BMP15O95972 392 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 SKILP12757 684 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 DPEP1P16444 411 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 NFIAQ12857 509 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
COL25A1-202ENST00000399127 KIAA0825Q8IV33 1275 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 BARHL2Q9NY43 387 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 SLX4Q8IY92 1834 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
COL25A1-202ENST00000399127 SARSP49591 514 aaKnown RBP13.37□□□□□ -0.27
COL25A1-202ENST00000399127 SMYD4Q8IYR2 804 aaPredicted RBP13.37□□□□□ -0.27
COL25A1-202ENST00000399127 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 SH3GLB2Q9NR46 395 aa13.37□□□□□ -0.27
COL25A1-202ENST00000399127 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 NAPAP54920 295 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 MORC3Q14149 939 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 AOC3Q16853 763 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 CFAP100Q494V2 611 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 NT5DC1Q5TFE4 455 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 CDC42EP5Q6NZY7 148 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 PIGSQ96S52 555 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 BLZF1Q9H2G9 400 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-202ENST00000399127 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 NT5C2P49902 561 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 UBASH3AP57075 661 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 ATP2B2Q01814 1243 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 ZFPM1Q8IX07 1006 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-202ENST00000399127 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
COL25A1-202ENST00000399127 QSER1Q2KHR3 1735 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 M0R2N6 131 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 CCZ1BP86790 482 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 CCZ1P86791 482 aaPredicted RBP13.35□□□□□ -0.27
COL25A1-202ENST00000399127 TCP10Q12799 353 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
COL25A1-202ENST00000399127 TEKT1Q969V4 418 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 MED15Q96RN5 788 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 SERPINB13Q9UIV8 391 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 TMEM232C9JQI7 657 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 MPHOSPH10O00566 681 aaKnown RBP13.35□□□□□ -0.27
COL25A1-202ENST00000399127 ECE2O60344 883 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 POLD1P28340 1107 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 RBM5P52756 815 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL25A1-202ENST00000399127 GABPAQ06546 454 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
COL25A1-202ENST00000399127 SPZ1Q9BXG8 430 aa13.35□□□□□ -0.27
COL25A1-202ENST00000399127 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
COL25A1-202ENST00000399127 FOCADQ5VW36 1801 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 COBLO75128 1261 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 PDHBP11177 359 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 STX17P56962 302 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 SLC20A2Q08357 652 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 TPD52L1Q16890 204 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 TSC1Q92574 1164 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 LZTS2Q9BRK4 669 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 TRMT1Q9NXH9 659 aaKnown RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 SUGT1Q9Y2Z0 365 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 SMCO2A6NFE2 343 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 CRKP46108 304 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms