RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 RPN1P04843 607 aaKnown RBP12.85□□□□□ -0.35
C4orf3-201ENST00000399075 KRT31Q15323 416 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
C4orf3-201ENST00000399075 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 ANKRD20A12PQ8NF67 263 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 MAD2L2Q9UI95 211 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 SOWAHDA6NJG2 315 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 GNPATO15228 680 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 BAG3O95817 575 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 USP5P45974 858 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 RAD9BQ6WBX8 426 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
C4orf3-201ENST00000399075 DISC1Q9NRI5 854 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
C4orf3-201ENST00000399075 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
C4orf3-201ENST00000399075 ADAMTS3O15072 1205 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 GYPCP04921 128 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 PRPHP41219 470 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 KCNQ4P56696 695 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 TUBB2AQ13885 445 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 KCNB1Q14721 858 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 TUBB2BQ9BVA1 445 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 BLZF1Q9H2G9 400 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 LY75O60449 1722 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 NPHP1O15259 732 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 LDHCP07864 332 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 STAT6P42226 847 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 PPP2R3AQ06190 1150 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 GRAPQ13588 217 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 MTF1Q14872 753 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 TCP11X2Q5H9J9 407 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 GPR161Q8N6U8 529 aaKnown RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 BARHL2Q9NY43 387 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 H7C1D1 291 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 CASP14P31944 242 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 STAMQ92783 540 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 CCSER1Q9C0I3 900 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
C4orf3-201ENST00000399075 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
C4orf3-201ENST00000399075 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
C4orf3-201ENST00000399075 N4BP3O15049 544 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 CREBRFQ8IUR6 639 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 CUEDC2Q9H467 287 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 PCDHA6Q9UN73 950 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 PCDHA8Q9Y5H6 950 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 CDK5RAP2Q96SN8 1893 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 THSD7AQ9UPZ6 1657 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 KCNJ18B7U540 433 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 STXBP3O00186 592 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 ZNF771Q7L3S4 317 aaPredicted RBP12.83□□□□□ -0.36
C4orf3-201ENST00000399075 ADSSL1Q8N142 457 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 DYNLL2Q96FJ2 89 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 SPZ1Q9BXG8 430 aa12.83□□□□□ -0.36
C4orf3-201ENST00000399075 KIF5CO60282 957 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 SLC35G1Q2M3R5 365 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 KARSQ15046 597 aaKnown RBP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 ZNF444Q8N0Y2 327 aaPredicted RBP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 AK8Q96MA6 479 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 ABHD10Q9NUJ1 306 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 KBTBD4Q9NVX7 518 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 CCNL1Q9UK58 526 aaPredicted RBP12.82□□□□□ -0.36
C4orf3-201ENST00000399075 MYH1P12882 1939 aa12.82□□□□□ -0.36
C4orf3-201ENST00000399075 CYTH3O43739 400 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 RASA1P20936 1047 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 SMARCA1P28370 1054 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms