RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ABRAQ8N0Z2 381 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 FAM227BQ96M60 508 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 NUP88Q99567 741 aaPredicted RBP15.92■□□□□ 0.14
VCX3A-202ENST00000398729 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 FLRT1Q9NZU1 646 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 CDH23Q9H251 3354 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 A0A0D9SFI3 127 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 FCER1AP12319 257 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 COPB2P35606 906 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 CTDSPL2Q05D32 466 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 ALX1Q15699 326 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 FAM47AQ5JRC9 791 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 PPP4R3BQ5MIZ7 849 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 RIOX2Q8IUF8 465 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 GMCL1P1Q8NEA9 526 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 ANAPC4Q9UJX5 808 aa15.91■□□□□ 0.14
VCX3A-202ENST00000398729 TSPY2A6NKD2 308 aa15.9■□□□□ 0.14
VCX3A-202ENST00000398729 STAT3P40763 770 aa15.9■□□□□ 0.14
VCX3A-202ENST00000398729 NMIQ13287 307 aaPredicted RBP15.9■□□□□ 0.14
VCX3A-202ENST00000398729 OLFML2BQ68BL8 750 aa15.9■□□□□ 0.14
VCX3A-202ENST00000398729 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
VCX3A-202ENST00000398729 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
VCX3A-202ENST00000398729 SENP6Q9GZR1 1112 aaPredicted RBP15.9■□□□□ 0.14
VCX3A-202ENST00000398729 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
VCX3A-202ENST00000398729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
VCX3A-202ENST00000398729 MSCO60682 206 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 COBLO75128 1261 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 IGHA2P01877 340 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 FGAP02671 866 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 SDSP20132 328 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 CYP2C19P33261 490 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
VCX3A-202ENST00000398729 SLFN13Q68D06 897 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.89■□□□□ 0.13
VCX3A-202ENST00000398729 REPS2Q8NFH8 660 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 MMP19Q99542 508 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
VCX3A-202ENST00000398729 CCDC171Q6TFL3 1326 aa15.89■□□□□ 0.13
VCX3A-202ENST00000398729 HSPD1P10809 573 aaKnown RBP15.88■□□□□ 0.13
VCX3A-202ENST00000398729 CNGA1P29973 690 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 KCTD2Q14681 263 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 ZNF589Q86UQ0 364 aaPredicted RBP15.88■□□□□ 0.13
VCX3A-202ENST00000398729 TRPV1Q8NER1 839 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 FAM161BQ96MY7 647 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 TEX13BQ9BXU2 312 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 INCENPQ9NQS7 918 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
VCX3A-202ENST00000398729 FEM1BQ9UK73 627 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 STX8Q9UNK0 236 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 ZMYM6O95789 1325 aa15.88■□□□□ 0.13
VCX3A-202ENST00000398729 ZNFX1Q9P2E3 1918 aaKnown RBP15.88■□□□□ 0.13
VCX3A-202ENST00000398729 ORC4O43929 436 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
VCX3A-202ENST00000398729 ZBED4O75132 1171 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 BMP3P12645 472 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 CYBAP13498 195 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 SNRNP48Q6IEG0 339 aaKnown RBP15.87■□□□□ 0.13
VCX3A-202ENST00000398729 KIFC2Q96AC6 838 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 MAML3Q96JK9 1138 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 TOMM22Q9NS69 142 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 DIAPH3Q9NSV4 1193 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 ISY1Q9ULR0 285 aaKnown RBP15.87■□□□□ 0.13
VCX3A-202ENST00000398729 FRMPD3Q5JV73 1810 aa15.87■□□□□ 0.13
VCX3A-202ENST00000398729 HIP1O00291 1037 aa15.86■□□□□ 0.13
VCX3A-202ENST00000398729 ATP2A1O14983 1001 aa15.86■□□□□ 0.13
VCX3A-202ENST00000398729 FGRP09769 529 aa15.86■□□□□ 0.13
VCX3A-202ENST00000398729 ATN1P54259 1190 aaPredicted RBP15.86■□□□□ 0.13
VCX3A-202ENST00000398729 CPXCR1Q8N123 301 aa15.86■□□□□ 0.13
VCX3A-202ENST00000398729 GMCL1Q96IK5 515 aa15.86■□□□□ 0.13
VCX3A-202ENST00000398729 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
VCX3A-202ENST00000398729 NMT2O60551 498 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 FDX1P10109 184 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 SLC1A4P43007 532 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 SLC4A3P48751 1232 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 STAT2P52630 851 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
VCX3A-202ENST00000398729 RRP12Q5JTH9 1297 aaKnown RBP15.85■□□□□ 0.13
VCX3A-202ENST00000398729 CWC27Q6UX04 472 aaKnown RBP15.85■□□□□ 0.13
VCX3A-202ENST00000398729 CHURC1Q8WUH1 139 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 SLC38A10Q9HBR0 1119 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 DIS3Q9Y2L1 958 aaKnown RBP15.85■□□□□ 0.13
VCX3A-202ENST00000398729 TACC3Q9Y6A5 838 aa15.85■□□□□ 0.13
VCX3A-202ENST00000398729 MUC3AQ02505 3323 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 TMEM232C9JQI7 657 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 SEPT4O43236 478 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 PGK2P07205 417 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 PCP11498 1178 aaKnown RBP15.84■□□□□ 0.13
VCX3A-202ENST00000398729 MCCP23508 829 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 OAZ1P54368 228 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 HAND2P61296 217 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
VCX3A-202ENST00000398729 SHHQ15465 462 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 ZNF792Q3KQV3 632 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 FAM160B2Q86V87 743 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
VCX3A-202ENST00000398729 LBHD1Q9BQE6 289 aaPredicted RBP15.84■□□□□ 0.13
VCX3A-202ENST00000398729 SEMA6BQ9H3T3 888 aa15.84■□□□□ 0.13
VCX3A-202ENST00000398729 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
VCX3A-202ENST00000398729 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms