RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 SH3RF1Q7Z6J0 888 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 CACTINQ8WUQ7 758 aaKnown RBP17.39■□□□□ 0.37
MBD1-209ENST00000398495 PAGE5Q96GU1 130 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 XPO4Q9C0E2 1151 aaKnown RBP17.39■□□□□ 0.37
MBD1-209ENST00000398495 SMC2O95347 1197 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 ATP1A3P13637 1013 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 AFMP43652 599 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 RBM5P52756 815 aaKnown RBP eCLIP17.39■□□□□ 0.37
MBD1-209ENST00000398495 TCP10Q12799 353 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 ZMYND12Q9H0C1 365 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 EHD4Q9H223 541 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
MBD1-209ENST00000398495 SEC63Q9UGP8 760 aaKnown RBP17.39■□□□□ 0.37
MBD1-209ENST00000398495 TTLL1O95922 423 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 SNHG28P0DPA3 235 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 CASP1P29466 404 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 ASPRV1Q53RT3 343 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 FAM177A1Q8N128 213 aaPredicted RBP17.38■□□□□ 0.37
MBD1-209ENST00000398495 SPATA20Q8TB22 786 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 SMCO2A6NFE2 343 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 FAM196BA6NMK8 535 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
MBD1-209ENST00000398495 FANCCQ00597 558 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 E2F4Q16254 413 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 SH3BP5LQ7L8J4 393 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 MRIQ9BWK5 157 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 GPCPD1Q9NPB8 672 aa17.38■□□□□ 0.37
MBD1-209ENST00000398495 R3HCC1Q9Y3T6 440 aaKnown RBP17.38■□□□□ 0.37
MBD1-209ENST00000398495 PSME4Q14997 1843 aa17.37■□□□□ 0.37
MBD1-209ENST00000398495 DDTLA6NHG4 134 aaPredicted RBP17.37■□□□□ 0.37
MBD1-209ENST00000398495 HDLBPQ00341 1268 aaKnown RBP17.37■□□□□ 0.37
MBD1-209ENST00000398495 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
MBD1-209ENST00000398495 ARL6IP4Q66PJ3 421 aaKnown RBP17.37■□□□□ 0.37
MBD1-209ENST00000398495 CCDC12Q8WUD4 166 aaPredicted RBP17.37■□□□□ 0.37
MBD1-209ENST00000398495 TMEM60Q9H2L4 133 aa17.37■□□□□ 0.37
MBD1-209ENST00000398495 YDJCA8MPS7 323 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 C21orf2O43822 256 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 FMR1Q06787 632 aaKnown RBP eCLIP17.36■□□□□ 0.37
MBD1-209ENST00000398495 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 TRIML1Q8N9V2 468 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 IDI2Q9BXS1 227 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 C6orf50Q9HD87 102 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
MBD1-209ENST00000398495 LONP1P36776 959 aaKnown RBP17.36■□□□□ 0.37
MBD1-209ENST00000398495 ZNF543Q08ER8 600 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 DPYDQ12882 1025 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 KRT25Q7Z3Z0 450 aa17.36■□□□□ 0.37
MBD1-209ENST00000398495 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 ATP2B2Q01814 1243 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 SOGA3Q5TF21 947 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 PDXDC2PQ6P474 469 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 DPF2Q92785 391 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 FANCLQ9NW38 375 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 SERPINA10Q9UK55 444 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 NONOQ15233 471 aaKnown RBP eCLIP17.35■□□□□ 0.37
MBD1-209ENST00000398495 LRRC8AQ8IWT6 810 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 TRMT44Q8IYL2 757 aaKnown RBP17.35■□□□□ 0.37
MBD1-209ENST00000398495 STAMQ92783 540 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 COA7Q96BR5 231 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 MED15Q96RN5 788 aa17.35■□□□□ 0.37
MBD1-209ENST00000398495 ESYT2A0FGR8 921 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 GNA11P29992 359 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 CDC25AP30304 524 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 TTBK2Q6IQ55 1244 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 TMC6Q7Z403 805 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 DHX36Q9H2U1 1008 aaKnown RBP17.34■□□□□ 0.37
MBD1-209ENST00000398495 TMEM260Q9NX78 707 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 DACH1Q9UI36 760 aa17.34■□□□□ 0.37
MBD1-209ENST00000398495 PP2D1A8MPX8 630 aa17.33■□□□□ 0.37
MBD1-209ENST00000398495 CCDC96Q2M329 555 aa17.33■□□□□ 0.37
MBD1-209ENST00000398495 IQUBQ8NA54 791 aa17.33■□□□□ 0.37
MBD1-209ENST00000398495 CCDC17Q96LX7 622 aa17.33■□□□□ 0.37
MBD1-209ENST00000398495 JMJD4Q9H9V9 463 aa17.33■□□□□ 0.37
MBD1-209ENST00000398495 BIN2Q9UBW5 565 aaPredicted RBP17.33■□□□□ 0.37
MBD1-209ENST00000398495 COL4A5P29400 1685 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 hCG_1984214I3L0E3 225 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
MBD1-209ENST00000398495 CFAP100Q494V2 611 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 JAKMIP3Q5VZ66 844 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 DTHD1Q6ZMT9 781 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
MBD1-209ENST00000398495 ADGRF4Q8IZF3 695 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 ZNF713Q8N859 430 aaPredicted RBP17.33■□□□□ 0.36
MBD1-209ENST00000398495 MTRQ99707 1265 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 BLZF1Q9H2G9 400 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 TDRD3Q9H7E2 651 aaKnown RBP17.33■□□□□ 0.36
MBD1-209ENST00000398495 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
MBD1-209ENST00000398495 PPP1R11O60927 126 aaPredicted RBP17.32■□□□□ 0.36
MBD1-209ENST00000398495 SLC16A2P36021 539 aa17.32■□□□□ 0.36
MBD1-209ENST00000398495 LETM2Q2VYF4 491 aa17.32■□□□□ 0.36
MBD1-209ENST00000398495 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
MBD1-209ENST00000398495 DEFB132Q7Z7B7 95 aa17.32■□□□□ 0.36
MBD1-209ENST00000398495 IMPACTQ9P2X3 320 aa17.32■□□□□ 0.36
MBD1-209ENST00000398495 PI4KBQ9UBF8 816 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms