RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 HAUS8Q9BT25 410 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 RABGAP1Q9Y3P9 1069 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 RGS12O14924 1447 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 RNF123Q5XPI4 1314 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 PALM3A6NDB9 673 aaPredicted RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 DDX39AO00148 427 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 RIOK3O14730 519 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 PFKFB1P16118 471 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 CDC25BP30305 580 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TRAPPC10P48553 1259 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 MTX1Q13505 466 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 CUL4BQ13620 913 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 RRAGAQ7L523 313 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 KRT27Q7Z3Y8 459 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 NELFCDQ8IXH7 590 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 COL4A3BPQ9Y5P4 624 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 BZW2Q9Y6E2 419 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 GOLGA8QA0A0J9YX86 632 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 GOLGA8OA6NCC3 632 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 GOLGA8NF8WBI6 632 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TNNI1P19237 187 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TFDP1Q14186 410 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 ARHGEF16Q5VV41 709 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TRIM50Q86XT4 487 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 HAUS4Q9H6D7 363 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 PSTPIP2Q9H939 334 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 IFT122Q9HBG6 1241 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 HOMER3Q9NSC5 361 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 LMBRD1Q9NUN5 540 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 ZBTB24O43167 697 aaPredicted RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TAF5LO75529 589 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 U2AF2P26368 475 aaKnown RBP eCLIP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 POLR2BP30876 1174 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 YARSP54577 528 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 BPIFB4P59827 614 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 RPS8P62241 208 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 KRT81Q14533 505 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 USH1GQ495M9 461 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 OTUD7BQ6GQQ9 843 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 MIPOL1Q8TD10 442 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 U2AF1L4Q8WU68 220 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 MRFAP1L1Q96HT8 127 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 NRBP2Q9NSY0 501 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 KCNJ14Q9UNX9 436 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TCP1P17987 556 aaKnown RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 LIG4P49917 911 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 UBE3CQ15386 1083 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 ANKRD20A3Q5VUR7 823 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 TYW1BQ6NUM6 668 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 OTUD7AQ8TE49 926 aaPredicted RBP6.86□□□□□ -1.31
PGBD4-201ENST00000397766 SLF1Q9BQI6 1058 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 KIAA1468Q9P260 1216 aa6.86□□□□□ -1.31
PGBD4-201ENST00000397766 MLH3Q9UHC1 1453 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 A0A1W2PQ27 194 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 A0A1W2PQ64 194 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 A0A1W2PQD8 194 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 SCG2P13521 617 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 GARSP41250 739 aaKnown RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 RBM6P78332 1123 aaKnown RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 LMNB2Q03252 620 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 FAM102BQ5T8I3 360 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 TPH2Q8IWU9 490 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PALM2Q8IXS6 379 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PHKBQ93100 1093 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 VCX3AQ9NNX9 186 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 CSADQ9Y600 493 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ADCY9O60503 1353 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 RGS16O15492 202 aaPredicted RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 TBC1D8O95759 1140 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PNOCQ13519 176 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ZBTB38Q8NAP3 1195 aaPredicted RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 FANCBQ8NB91 859 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PROCA1Q8NCQ7 364 aaPredicted RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 EPSTI1Q96J88 318 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 KRT12Q99456 494 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ZSWIM6Q9HCJ5 1215 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PANK4Q9NVE7 773 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 IPO11Q9UI26 975 aaKnown RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PTPRTO14522 1441 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 CLASP1Q7Z460 1538 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PNMA6EA0A0J9YXQ4 647 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MYL1P05976 194 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 GAP43P17677 238 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 STX2P32856 288 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ELF2Q15723 593 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ARHGEF2Q92974 986 aaKnown RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 JPH2Q9BR39 696 aaPredicted RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ADPGKQ9BRR6 497 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 BLZF1Q9H2G9 400 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MLXIPQ9HAP2 919 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 VPS54Q9P1Q0 977 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 AATKQ6ZMQ8 1374 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 THAP12O43422 761 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 NAA25Q14CX7 972 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PPP2R5AQ15172 486 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MUM1L1Q5H9M0 696 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms