RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SLC45A1Q9Y2W3 748 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 THSD7BQ9C0I4 1608 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 DHX16O60231 1041 aaKnown RBP22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 INHBEP58166 350 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 KIF23Q02241 960 aaPredicted RBP22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SREBF2Q12772 1141 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CUL4AQ13619 759 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CHURC1Q8WUH1 139 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SLF1Q9BQI6 1058 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SPZ1Q9BXG8 430 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 UBA5Q9GZZ9 404 aa22.63■■□□□ 1.21
MAP1LC3A-203ENST00000397709 MYPNQ86TC9 1320 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CNTNAP5Q8WYK1 1306 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 WDR33Q9C0J8 1336 aaKnown RBP22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CYTH3O43739 400 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 AOC2O75106 756 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 FLOT1O75955 427 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 IFNAR1P17181 557 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SLC16A2P36021 539 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SYDE2Q5VT97 1194 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CMTR1Q8N1G2 835 aaKnown RBP22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 FAM43AQ8N2R8 423 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 RIOX1Q9H6W3 641 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PPP1R9AQ9ULJ8 1098 aa22.62■■□□□ 1.21
MAP1LC3A-203ENST00000397709 IGF2BP3O00425 579 aaKnown RBP eCLIP22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CPLX1O14810 134 aa22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CTDNEP1O95476 244 aa22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ANP32AP39687 249 aaKnown RBP22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 TM4SF4P48230 202 aa22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 VEGFBP49765 207 aa22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 IKQ13123 557 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 COG2Q14746 738 aa22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CPLX2Q6PUV4 134 aaKnown RBP22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ASCC2Q9H1I8 757 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ZCCHC17Q9NP64 241 aaKnown RBP22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PRR12Q9ULL5 1215 aa22.61■■□□□ 1.21
MAP1LC3A-203ENST00000397709 A0A0G2JMZ2 1700 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PDHXO00330 501 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 OSBPP22059 807 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 DSG3P32926 999 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 BECN1Q14457 450 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 IFNL1Q8IU54 200 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 REM2Q8IYK8 340 aaPredicted RBP22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ADGRF4Q8IZF3 695 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PRPF38AQ8NAV1 312 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 NSUN7Q8NE18 718 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 MTMR8Q96EF0 704 aa22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 LLPHQ9BRT6 129 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SPDYE16A6NNV3 312 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CDKL5O76039 1030 aa22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 IRX3P78415 501 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 KIFC2Q96AC6 838 aa22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 JMJD4Q9H9V9 463 aa22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PNMA3Q9UL41 463 aa22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ADAMTS5Q9UNA0 930 aa22.59■■□□□ 1.21
MAP1LC3A-203ENST00000397709 BAZ2BQ9UIF8 2168 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 MAP2K2P36507 400 aa22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 LBX2Q6XYB7 198 aa22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SMARCC2Q8TAQ2 1214 aa22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PHKBQ93100 1093 aa22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ATG4CQ96DT6 458 aa22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 P2RX7Q99572 595 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 RNF26Q9BY78 433 aaPredicted RBP22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 RANBP17Q9H2T7 1088 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 HOXC10Q9NYD6 342 aa22.58■■□□□ 1.21
MAP1LC3A-203ENST00000397709 STK36Q9NRP7 1315 aa22.57■■□□□ 1.2
MAP1LC3A-203ENST00000397709 PRPF3O43395 683 aaKnown RBP22.57■■□□□ 1.2
MAP1LC3A-203ENST00000397709 FMNL1O95466 1100 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3A-203ENST00000397709 HERVK_113P62684 666 aa22.57■■□□□ 1.2
MAP1LC3A-203ENST00000397709 SLC26A6Q9BXS9 759 aa22.57■■□□□ 1.2
MAP1LC3A-203ENST00000397709 VAT1LQ9HCJ6 419 aa22.57■■□□□ 1.2
MAP1LC3A-203ENST00000397709 PTPDC1A2A3K4 754 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 VWA5AO00534 786 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 JAK2O60674 1132 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 FDX1P10109 184 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 SSRP1Q08945 709 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 CDC37Q16543 378 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 SAMD1Q6SPF0 538 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 REPS2Q8NFH8 660 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 INTS4Q96HW7 963 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 PIGSQ96S52 555 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 PARK7Q99497 189 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 SLC38A10Q9HBR0 1119 aa22.56■■□□□ 1.2
MAP1LC3A-203ENST00000397709 MYH6P13533 1939 aa22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 COL11A1P12107 1806 aaPredicted RBP22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 PPFIA3O75145 1194 aa22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 CYP2C8P10632 490 aa22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 POTEEQ6S8J3 1075 aa22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 TRIM22Q8IYM9 498 aa22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 RRP36Q96EU6 259 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 RBM27Q9P2N5 1060 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 V9GY48 417 aaPredicted RBP22.55■■□□□ 1.2
MAP1LC3A-203ENST00000397709 ZBTB5O15062 677 aa22.54■■□□□ 1.2
MAP1LC3A-203ENST00000397709 DTNBO60941 627 aa22.54■■□□□ 1.2
MAP1LC3A-203ENST00000397709 ZBED4O75132 1171 aa22.54■■□□□ 1.2
MAP1LC3A-203ENST00000397709 FDPSP14324 419 aaKnown RBP22.54■■□□□ 1.2
MAP1LC3A-203ENST00000397709 SNAP25P60880 206 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms