RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 NPR1P16066 1061 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 IFNAR1P17181 557 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 CRKP46108 304 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 SLC39A14Q15043 492 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 NEK8Q86SG6 692 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 MASTLQ96GX5 879 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 BAG1Q99933 345 aaPredicted RBP12.5□□□□□ -0.41
IFT140-202ENST00000397417 SLF1Q9BQI6 1058 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 SEMA3EO15041 775 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 ECE2O60344 883 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 CAVIN2O95810 425 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 CSF1RP07333 972 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 PAK1Q13153 545 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 KRBA2Q6ZNG9 492 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
IFT140-202ENST00000397417 TMOD4Q9NZQ9 345 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 SFI1A8K8P3 1242 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 AKR1B1P15121 316 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 NLRP12P59046 1061 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 RASGRP2Q7LDG7 609 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
IFT140-202ENST00000397417 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 PPP1R16BQ96T49 567 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
IFT140-202ENST00000397417 LY9Q9HBG7 655 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 BCCIPQ9P287 314 aaKnown RBP eCLIP12.49□□□□□ -0.41
IFT140-202ENST00000397417 KIAA1024Q9UPX6 916 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 GAS7O60861 476 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
IFT140-202ENST00000397417 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 TBC1D16Q8TBP0 767 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
IFT140-202ENST00000397417 ARHGEF35A5YM69 484 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 MMP1P03956 469 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 CYP2J2P51589 502 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 BIRC3Q13489 604 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 PRIMPOLQ96LW4 560 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
IFT140-202ENST00000397417 CETN1Q12798 172 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 USP49Q70CQ1 688 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 MRPL44Q9H9J2 332 aaKnown RBP12.48□□□□□ -0.41
IFT140-202ENST00000397417 TTLL1O95922 423 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 NEFHP12036 1026 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 CMA1P23946 247 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
IFT140-202ENST00000397417 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
IFT140-202ENST00000397417 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
IFT140-202ENST00000397417 ITSN1Q15811 1721 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 POTEMA6NI47 508 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 GPBP1Q86WP2 473 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 ZNF668Q96K58 619 aaPredicted RBP12.47□□□□□ -0.41
IFT140-202ENST00000397417 GOLPH3LQ9H4A5 285 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
IFT140-202ENST00000397417 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 KRT13P13646 458 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 ARHGAP44Q17R89 818 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
IFT140-202ENST00000397417 PAFAH1B1P43034 410 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 ANTXR2P58335 489 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 SPAG1Q07617 926 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
IFT140-202ENST00000397417 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 DNM3Q9UQ16 869 aa12.47□□□□□ -0.41
IFT140-202ENST00000397417 CCDC122Q5T0U0 273 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 CCDC175P0C221 793 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 ZNF341Q9BYN7 854 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.41
IFT140-202ENST00000397417 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.42
IFT140-202ENST00000397417 CDR1P51861 262 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 IGBP1P78318 339 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 CCDC93Q567U6 631 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 ATL3Q6DD88 541 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 GLG1Q92896 1179 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 PYM1Q9BRP8 204 aaKnown RBP12.46□□□□□ -0.42
IFT140-202ENST00000397417 OVOS2A0A0G2JMS6 1433 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 NOP56O00567 594 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms