RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CYP26C1Q6V0L0 522 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 CTAGE6Q86UF2 777 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 CTAGE4Q8IX94 777 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 MSL3Q8N5Y2 521 aaKnown RBP15.71■□□□□ 0.11
NUP98-204ENST00000397004 PAK1Q13153 545 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 WDR93Q6P2C0 686 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 CCDC51Q96ER9 411 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 KLRC4O43908 158 aa15.71■□□□□ 0.1
NUP98-204ENST00000397004 FGRP09769 529 aa15.71■□□□□ 0.1
NUP98-204ENST00000397004 FAM47AQ5JRC9 791 aa15.71■□□□□ 0.1
NUP98-204ENST00000397004 ESR2Q92731 530 aa15.71■□□□□ 0.1
NUP98-204ENST00000397004 RPN1P04843 607 aaKnown RBP15.7■□□□□ 0.1
NUP98-204ENST00000397004 UBXN1Q04323 297 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 WHAMMP3Q1A5X7 153 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
NUP98-204ENST00000397004 AGPSO00116 658 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 PARP1P09874 1014 aaKnown RBP15.7■□□□□ 0.1
NUP98-204ENST00000397004 CYP2D6P10635 497 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 KLRK1P26718 216 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 ZNF658Q5TYW1 1059 aaPredicted RBP15.7■□□□□ 0.1
NUP98-204ENST00000397004 TTYH3Q9C0H2 523 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 RRP15Q9Y3B9 282 aaKnown RBP15.7■□□□□ 0.1
NUP98-204ENST00000397004 ZNF263O14978 683 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 INTS5Q6P9B9 1019 aaKnown RBP15.7■□□□□ 0.1
NUP98-204ENST00000397004 PLIN2Q99541 437 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 DNAJC7Q99615 494 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 TMEM60Q9H2L4 133 aa15.7■□□□□ 0.1
NUP98-204ENST00000397004 PSMD14O00487 310 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 ADSSL1Q8N142 457 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 MB21D1Q8N884 522 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 ERVV-1B6SEH8 477 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
NUP98-204ENST00000397004 USP14P54578 494 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 FILIP1LQ4L180 1135 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 RCSD1Q6JBY9 416 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 MAGEB6P1A0A0J9YX57 407 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 RNF41Q9H4P4 317 aaPredicted RBP15.69■□□□□ 0.1
NUP98-204ENST00000397004 FAM204AQ9H8W3 233 aa15.69■□□□□ 0.1
NUP98-204ENST00000397004 GPS2Q13227 327 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
NUP98-204ENST00000397004 USP17L12C9JPN9 530 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 USP17L21D6R901 530 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 RPS6KA5O75582 802 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 MRPS25P82663 173 aaKnown RBP15.68■□□□□ 0.1
NUP98-204ENST00000397004 SLC4A8Q2Y0W8 1093 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.12e-6■■□□□ 13.9
NUP98-204ENST00000397004 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 AK7Q96M32 723 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 DUSP9Q99956 384 aaKnown RBP15.68■□□□□ 0.1
NUP98-204ENST00000397004 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
NUP98-204ENST00000397004 EZH2Q15910 746 aaKnown RBP15.68■□□□□ 0.1
NUP98-204ENST00000397004 HDAC7Q8WUI4 952 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 HPCAL4Q9UM19 191 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 A0A1B0GUL6 1792 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
NUP98-204ENST00000397004 M0R2N6 131 aa15.67■□□□□ 0.1
NUP98-204ENST00000397004 PAPD7Q5XG87 772 aaKnown RBP15.67■□□□□ 0.1
NUP98-204ENST00000397004 SMCR8Q8TEV9 937 aaPredicted RBP15.67■□□□□ 0.1
NUP98-204ENST00000397004 CCDC102AQ96A19 550 aa15.67■□□□□ 0.1
NUP98-204ENST00000397004 PLEKP08567 350 aaPredicted RBP15.67■□□□□ 0.1
NUP98-204ENST00000397004 EVA1CP58658 441 aa15.67■□□□□ 0.1
NUP98-204ENST00000397004 IL6STP40189 918 aaPredicted RBP15.67■□□□□ 0.1
NUP98-204ENST00000397004 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
NUP98-204ENST00000397004 CYP27A1Q02318 531 aa15.67■□□□□ 0.1
NUP98-204ENST00000397004 CATIPQ7Z7H3 387 aa15.67■□□□□ 0.1
NUP98-204ENST00000397004 STAG2Q8N3U4 1231 aa15.67■□□□□ 0.1
NUP98-204ENST00000397004 LGALS16A8MUM7 142 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 B4DLN1 442 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 RNF40O75150 1001 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 NTSR2O95665 410 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 PIP4K2BP78356 416 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 TTI2Q6NXR4 508 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 GPIHBP1Q8IV16 184 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 EHD4Q9H223 541 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 MYO1AQ9UBC5 1043 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 CAPN11Q9UMQ6 739 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
NUP98-204ENST00000397004 SCG2P13521 617 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 RSPH14Q9UHP6 348 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 AARSP49588 968 aaKnown RBP eCLIP15.66■□□□□ 0.14e-6■■□□□ 13.1
NUP98-204ENST00000397004 MEA1Q16626 185 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 KRT26Q7Z3Y9 468 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 OR8K1Q8NGG5 319 aa15.66■□□□□ 0.1
NUP98-204ENST00000397004 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
NUP98-204ENST00000397004 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 EPHB6O15197 1021 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 TUBB2AQ13885 445 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 PFKFB3Q16875 520 aaPredicted RBP15.65■□□□□ 0.1
NUP98-204ENST00000397004 HPS3Q969F9 1004 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 TUBB2BQ9BVA1 445 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 GOLGB1Q14789 3259 aaKnown RBP15.65■□□□□ 0.1
NUP98-204ENST00000397004 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 FAM71BQ8TC56 605 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 DISC1Q9NRI5 854 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 IL17RBQ9NRM6 502 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 SMARCAL1Q9NZC9 954 aa15.65■□□□□ 0.1
NUP98-204ENST00000397004 ERLIN1O75477 346 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 NOP2P46087 812 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms