RNA–Protein interactions for RNA: ENST00000396847.7

TRIM5-203, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best) BASIC

Gene TRIM5, Length 3,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-203ENST00000396847 MAST3O60307 1309 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 IKBKBO14920 756 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 RAD21O60216 631 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 MBD4O95243 580 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 UBASH3AP57075 661 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 SLC39A6Q13433 755 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 CASP8Q14790 479 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 NANOGNBQ7Z5D8 188 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 CXorf38Q8TB03 319 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 OSBPL9Q96SU4 736 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■■■□□ 14.8
TRIM5-203ENST00000396847 LAMB1P07942 1786 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 LTBP1Q14766 1721 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GOLGA8BA8MQT2 603 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 LSM1O15116 133 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 ERLIN1O75477 346 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 HSPD1P10809 573 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 POLE2P56282 527 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GNG11P61952 73 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 IFT88Q13099 833 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 CUL3Q13618 768 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 TLDC1Q6P9B6 456 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 BRAPQ7Z569 592 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 RAB11FIP4Q86YS3 637 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 MFN1Q8IWA4 741 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 IGSF22Q8N9C0 903 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 SMCR8Q8TEV9 937 aaPredicted RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 DPF2Q92785 391 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GORASP1Q9BQQ3 440 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 UTP14AQ9BVJ6 771 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 ATP6V0A4Q9HBG4 840 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GPHNQ9NQX3 736 aaPredicted RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 UBR3Q6ZT12 1888 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 TOP1P11387 765 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 MYCLP1P12525 358 aaPredicted RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 VCAM1P19320 739 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 IRAK1P51617 712 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 MYL5Q02045 173 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 BEND6Q5SZJ8 279 aaPredicted RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 ANO1Q5XXA6 986 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 GOLGA1Q92805 767 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 CLIP3Q96DZ5 547 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 HOOK1Q9UJC3 728 aaKnown RBP8.28□□□□□ -1.08
TRIM5-203ENST00000396847 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
TRIM5-203ENST00000396847 KLF18A0A0U1RQI7 1052 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 KIF28PB7ZC32 967 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 CPLX1O14810 134 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 NDUFB5O43674 189 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 AHCYL1O43865 530 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 CCDC175P0C221 793 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 PIP4K2AP48426 406 aaPredicted RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 GNGT1P63211 74 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 IGBP1P78318 339 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 ROR2Q01974 943 aaKnown RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 ADCY1Q08828 1119 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 BRINP3Q76B58 766 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 IQCF2Q8IXL9 164 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 TRIM58Q8NG06 486 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 STAMBPL1Q96FJ0 436 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 LNPEPQ9UIQ6 1025 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 PARP3Q9Y6F1 533 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 OPLAHO14841 1288 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 OPA1O60313 960 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 WDHD1O75717 1129 aaPredicted RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 KRT38O76015 456 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 FESP07332 822 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 TXLNAP40222 546 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 SYKP43405 635 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 PTPN21Q16825 1174 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 TCERG1LQ5VWI1 586 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 TTLL7Q6ZT98 887 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 FAM228AQ86W67 206 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 CCDC13Q8IYE1 715 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 RNF168Q8IYW5 571 aaPredicted RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 ANKRD24Q8TF21 1146 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 UBE2OQ9C0C9 1292 aaKnown RBP8.27□□□□□ -1.09
TRIM5-203ENST00000396847 GBP3Q9H0R5 595 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 GJB4Q9NTQ9 266 aa8.27□□□□□ -1.09
TRIM5-203ENST00000396847 A0A087WZG4 1122 aa8.26□□□□□ -1.09
TRIM5-203ENST00000396847 TMEM232C9JQI7 657 aa8.26□□□□□ -1.09
TRIM5-203ENST00000396847 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
TRIM5-203ENST00000396847 FANCGO15287 622 aa8.26□□□□□ -1.09
TRIM5-203ENST00000396847 MEFVO15553 781 aaPredicted RBP8.26□□□□□ -1.09
TRIM5-203ENST00000396847 PTCD1O75127 700 aaKnown RBP8.26□□□□□ -1.09
TRIM5-203ENST00000396847 CMA1P23946 247 aa8.26□□□□□ -1.09
TRIM5-203ENST00000396847 SESN3P58005 492 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms