RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PNMA6FA0A0J9YX94 578 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 YEATS4O95619 227 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 MBD3O95983 291 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 INPP5BP32019 993 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 SLC16A2P36021 539 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 SAFBQ15424 915 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRIM39-204ENST00000396548 KLRG1Q96E93 195 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 NUP88Q99567 741 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-204ENST00000396548 VCPKMTQ9H867 229 aa14.64□□□□□ -0.07
TRIM39-204ENST00000396548 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-204ENST00000396548 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 USP17L10C9JJH3 530 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 PLA2G6O60733 806 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
TRIM39-204ENST00000396548 ANO1Q5XXA6 986 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 GALNT17Q6IS24 598 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 ZC3H15Q8WU90 426 aaKnown RBP14.63□□□□□ -0.07
TRIM39-204ENST00000396548 RLFQ13129 1914 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 ESYT2A0FGR8 921 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 DLK2Q6UY11 383 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-204ENST00000396548 ZBTB5O15062 677 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 BMP3P12645 472 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 EPHX2P34913 555 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 HEATR3Q7Z4Q2 680 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 SCYL3Q8IZE3 742 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
TRIM39-204ENST00000396548 USP2O75604 605 aaPredicted RBP14.62□□□□□ -0.07
TRIM39-204ENST00000396548 CALML3P27482 149 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 SLC39A14Q15043 492 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 BLIDQ8IZY5 108 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 TMEM63CQ9P1W3 806 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 PCDHA6Q9UN73 950 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 FZD1Q9UP38 647 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 PCDHA8Q9Y5H6 950 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 WNT7AO00755 349 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 NLRP5P59047 1200 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 CEBPZQ03701 1054 aaKnown RBP14.62□□□□□ -0.07
TRIM39-204ENST00000396548 WDR18Q9BV38 432 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 KIAA1683Q9H0B3 1180 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
TRIM39-204ENST00000396548 PTPRFP10586 1907 aa14.62□□□□□ -0.07
TRIM39-204ENST00000396548 ADM5C9JUS6 153 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 SF3A1Q15459 793 aaKnown RBP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 RILPL1Q5EBL4 403 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 PPP1R18Q6NYC8 613 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 CCDC148Q8NFR7 591 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 SEC63Q9UGP8 760 aaKnown RBP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 HOMER1Q86YM7 354 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 SH2D4AQ9H788 454 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 PCDHA7Q9UN72 937 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 PTPRAP18433 802 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 SUPT20HL1Q3ZLR7 823 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 AXDND1Q5T1B0 1012 aaPredicted RBP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 SPICE1Q8N0Z3 855 aa14.61□□□□□ -0.07
TRIM39-204ENST00000396548 DCPSQ96C86 337 aaKnown RBP14.61□□□□□ -0.07
TRIM39-204ENST00000396548 TMEM232C9JQI7 657 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 PPP6R2O75170 966 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 CLK2P49760 499 aaKnown RBP14.6□□□□□ -0.07
TRIM39-204ENST00000396548 SYDE2Q5VT97 1194 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 PCDHB6Q9Y5E3 794 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 GNL2Q13823 731 aaKnown RBP14.6□□□□□ -0.07
TRIM39-204ENST00000396548 QRICH1Q2TAL8 776 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 KCNG4Q8TDN1 519 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 COA7Q96BR5 231 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 WRNIP1Q96S55 665 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 BRMS1Q9HCU9 246 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
TRIM39-204ENST00000396548 CCDC12Q8WUD4 166 aaPredicted RBP14.59□□□□□ -0.07
TRIM39-204ENST00000396548 PRR12Q9ULL5 1215 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 SMCO2A6NFE2 343 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 SPTLC2O15270 562 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 NAPAP54920 295 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 CDC37Q16543 378 aaPredicted RBP14.59□□□□□ -0.07
TRIM39-204ENST00000396548 CAVIN1Q6NZI2 390 aaKnown RBP14.59□□□□□ -0.07
TRIM39-204ENST00000396548 EMILIN3Q9NT22 766 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 LIG1P18858 919 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 ADALQ6DHV7 355 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
TRIM39-204ENST00000396548 GOLPH3LQ9H4A5 285 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 RIC8AQ9NPQ8 531 aa14.59□□□□□ -0.07
TRIM39-204ENST00000396548 SMCHD1A6NHR9 2005 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 A0A1W2PQ27 194 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 A0A1W2PQ64 194 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 A0A1W2PQD8 194 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 EDIL3O43854 480 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 TRAPPC10P48553 1259 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 STAT2P52630 851 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-204ENST00000396548 LPAR1Q92633 364 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 DGKZQ13574 1117 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 ZSCAN23Q3MJ62 389 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 KRT26Q7Z3Y9 468 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms