RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CCDC92Q53HC0 331 aaPredicted RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 VCXQ9H320 206 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 MRGBPQ9NV56 204 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 PKD1L3Q7Z443 1732 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 PHKG2P15735 406 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 PECAM1P16284 738 aaPredicted RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 PAFAH1B1P43034 410 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 IRAK1P51617 712 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 STX17P56962 302 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 HTRA3P83110 453 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 NCAPH2Q6IBW4 605 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 FAM47EQ6ZV65 393 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 NANOGNBQ7Z5D8 188 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 CACNA2D3Q8IZS8 1091 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 TDRD7Q8NHU6 1098 aaKnown RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 TRIM11Q96F44 468 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 MYD88Q99836 296 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 SLC40A1Q9NP59 571 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 H0Y3Z8 333 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 MEFVO15553 781 aaPredicted RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 HIP1RO75146 1068 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 COG7P83436 770 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 RAB11FIP4Q86YS3 637 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 RRAGCQ9HB90 399 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 PSD3Q9NYI0 1048 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 MCM8Q9UJA3 840 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 DPEP1P16444 411 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 PSMA5P28066 241 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 MARCKSP29966 332 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 SEC24CP53992 1094 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 PTPN12Q05209 780 aaKnown RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 MUM1Q2TAK8 710 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 SDCCAG8Q86SQ7 713 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 SH2D3CQ8N5H7 860 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 ZNF483Q8TF39 744 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 LEO1Q8WVC0 666 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 NAPGQ99747 312 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 HELLSQ9NRZ9 838 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 TJP1Q07157 1748 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 ZNF609O15014 1411 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 CYP27B1O15528 508 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 ARHGAP6O43182 974 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 CTCFP49711 727 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 PRPF4BQ13523 1007 aaKnown RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 ATL2Q8NHH9 583 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 EZH1Q92800 747 aaPredicted RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 BRF1Q92994 677 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 CCDC47Q96A33 483 aaKnown RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 L3MBTL1Q9Y468 752 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 SUPT3HO75486 399 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 PARP1P09874 1014 aaKnown RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 SEPT6Q14141 434 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 OLFML1Q6UWY5 402 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 ARHGAP22Q7Z5H3 698 aa9.36□□□□□ -0.91
NDE1-202ENST00000396355 PAIP2BQ9ULR5 123 aaKnown RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 LUC7L2Q9Y383 392 aaKnown RBP9.36□□□□□ -0.91
NDE1-202ENST00000396355 LAMB4A4D0S4 1761 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 MACROD2A1Z1Q3 448 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 PRPHP41219 470 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 GUCY1A3Q02108 690 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 TBC1D8BQ0IIM8 1120 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 CCDC129Q6ZRS4 1044 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 METTL22Q9BUU2 404 aaPredicted RBP9.35□□□□□ -0.91
NDE1-202ENST00000396355 TAF5LO75529 589 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 ZFYP08048 801 aaPredicted RBP9.35□□□□□ -0.91
NDE1-202ENST00000396355 AIDAQ96BJ3 306 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 PHACTR1Q9C0D0 580 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 TAOK3Q9H2K8 898 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
NDE1-202ENST00000396355 GGT7Q9UJ14 662 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 SLC4A7Q9Y6M7 1214 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 NUP188Q5SRE5 1749 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 ATP5J2-PTCD1G3V325 749 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 PPFIA2O75334 1257 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 TFCP2Q12800 502 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 KBTBD12Q3ZCT8 623 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
NDE1-202ENST00000396355 NYAP1Q6ZVC0 841 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 TEKT4Q8WW24 435 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 STAMBPL1Q96FJ0 436 aa9.35□□□□□ -0.91
NDE1-202ENST00000396355 MMADHCQ9H3L0 296 aaPredicted RBP9.35□□□□□ -0.91
NDE1-202ENST00000396355 LRP5O75197 1615 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 RPS6KB1P23443 525 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 RFC1P35251 1148 aaPredicted RBP9.34□□□□□ -0.91
NDE1-202ENST00000396355 CCZ1BP86790 482 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 CCZ1P86791 482 aaPredicted RBP9.34□□□□□ -0.91
NDE1-202ENST00000396355 UBE3BQ7Z3V4 1068 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 PLA2G4DQ86XP0 818 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 WDR75Q8IWA0 830 aaKnown RBP9.34□□□□□ -0.91
NDE1-202ENST00000396355 SLC35F6Q8N357 371 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 CDC5LQ99459 802 aaKnown RBP9.34□□□□□ -0.91
NDE1-202ENST00000396355 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 SLF1Q9BQI6 1058 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 NOP53Q9NZM5 478 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms