RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 BADQ92934 168 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
XCR1-202ENST00000395946 GLT1D1Q96MS3 346 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 CDX2Q99626 313 aaPredicted RBP8.37□□□□□ -1.07
XCR1-202ENST00000395946 SLF1Q9BQI6 1058 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
XCR1-202ENST00000395946 LRRCC1Q9C099 1032 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 SEMA6BQ9H3T3 888 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 ABHD16BQ9H3Z7 469 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 STARD7Q9NQZ5 370 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 SLC4A4Q9Y6R1 1079 aa8.37□□□□□ -1.07
XCR1-202ENST00000395946 PLIN4Q96Q06 1357 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 SYNRGQ9UMZ2 1314 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.36□□□□□ -1.07
XCR1-202ENST00000395946 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.36□□□□□ -1.07
XCR1-202ENST00000395946 TRIM43BA6NCK2 446 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 CYP2D6P10635 497 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 FOSL2P15408 326 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 ACLYP53396 1101 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 C9orf50Q5SZB4 431 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 CTR9Q6PD62 1173 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 CCDC129Q6ZRS4 1044 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 GMCL1P1Q8NEA9 526 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 KLHDC9Q8NEP7 349 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 PANK1Q8TE04 598 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 APPBP2Q92624 585 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 MKL1Q969V6 931 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 TRIM43Q96BQ3 446 aaPredicted RBP8.36□□□□□ -1.07
XCR1-202ENST00000395946 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 DYNLL2Q96FJ2 89 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 MTIF3Q9H2K0 278 aaKnown RBP8.36□□□□□ -1.07
XCR1-202ENST00000395946 BOLA2Q9H3K6 86 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 TMEM39AQ9NV64 488 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 GREB1LQ9C091 1923 aaPredicted RBP8.36□□□□□ -1.07
XCR1-202ENST00000395946 PARP14Q460N5 1801 aa8.36□□□□□ -1.07
XCR1-202ENST00000395946 LOC102724159A0A0B4J2E5 919 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 F5H6K3 240 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 TLR3O15455 904 aaKnown RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 PRKAB2O43741 272 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 ZBED4O75132 1171 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 CABYRO75952 493 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 TIMP1P01033 207 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 KLRC3Q07444 240 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 PPIGQ13427 754 aaKnown RBP eCLIP8.35□□□□□ -1.07
XCR1-202ENST00000395946 PWP2Q15269 919 aaKnown RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 FAM83BQ5T0W9 1011 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 SNRNP48Q6IEG0 339 aaKnown RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 CCSAPQ6IQ19 270 aaPredicted RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 MFSD5Q6N075 450 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 PSRC1Q6PGN9 363 aaPredicted RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 SIRT2Q8IXJ6 389 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 KBTBD3Q8NAB2 608 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 UPF3AQ9H1J1 476 aaKnown RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 MKNK2Q9HBH9 465 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 SLC38A10Q9HBR0 1119 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 FBXO28Q9NVF7 368 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 FEM1BQ9UK73 627 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 CTDP1Q9Y5B0 961 aaPredicted RBP8.35□□□□□ -1.07
XCR1-202ENST00000395946 CUL9Q8IWT3 2517 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 MYH8P13535 1937 aa8.35□□□□□ -1.07
XCR1-202ENST00000395946 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 APBB1O00213 710 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 PLA2G6O60733 806 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 PQBP1O60828 265 aaKnown RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 TTLL1O95922 423 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 NDUFB10O96000 172 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 PGK1P00558 417 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 PGK2P07205 417 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 SLC3A2P08195 630 aaKnown RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 RASA1P20936 1047 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 DNAJB2P25686 324 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 GJA9P57773 515 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 EVX2Q03828 476 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 FAAP100Q0VG06 881 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 ACVR2BQ13705 512 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 PRAMEF19Q5SWL8 479 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 SH3RF1Q7Z6J0 888 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 FAM160B2Q86V87 743 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 CLEC10AQ8IUN9 316 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 TMEM199Q8N511 208 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 FERMT2Q96AC1 680 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 STRBPQ96SI9 672 aaKnown RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
XCR1-202ENST00000395946 NACAP1Q9BZK3 213 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 PUS7LQ9H0K6 701 aaKnown RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 TTYH1Q9H313 450 aaPredicted RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.34□□□□□ -1.07
XCR1-202ENST00000395946 PNMA2Q9UL42 364 aa8.34□□□□□ -1.07
XCR1-202ENST00000395946 ASB14A6NK59 587 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 GSG1L2A8MUP6 293 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 SNAI1O95863 264 aaPredicted RBP8.33□□□□□ -1.08
XCR1-202ENST00000395946 CDK7P50613 346 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 STAT2P52630 851 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms