RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 RBM46Q8TBY0 533 aaKnown RBP17.46■□□□□ 0.39
PTPN20-206ENST00000395722 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 ELP3Q9H9T3 547 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 MMP1P03956 469 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 XBP1P17861 261 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 VCAM1P19320 739 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 STAT2P52630 851 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 TRIM29Q14134 588 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
PTPN20-206ENST00000395722 PIBF1Q8WXW3 757 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
PTPN20-206ENST00000395722 GBA2Q9HCG7 927 aaPredicted RBP17.45■□□□□ 0.38
PTPN20-206ENST00000395722 VAT1LQ9HCJ6 419 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 SEC63Q9UGP8 760 aaKnown RBP17.45■□□□□ 0.38
PTPN20-206ENST00000395722 FEM1BQ9UK73 627 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 TRPM7Q96QT4 1865 aa17.45■□□□□ 0.38
PTPN20-206ENST00000395722 STXBP3O00186 592 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 ZBTB5O15062 677 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
PTPN20-206ENST00000395722 PPIL2Q13356 520 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 NPY5RQ15761 445 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 PRR12Q9ULL5 1215 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 KCNH4Q9UQ05 1017 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 LOC285556D6RIA3 1793 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 KIF3CO14782 793 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 DGKZQ13574 1117 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 FERMT3Q86UX7 667 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
PTPN20-206ENST00000395722 GPBP1L1Q9HC44 474 aaPredicted RBP17.44■□□□□ 0.38
PTPN20-206ENST00000395722 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
PTPN20-206ENST00000395722 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
PTPN20-206ENST00000395722 PARP14Q460N5 1801 aa17.43■□□□□ 0.38
PTPN20-206ENST00000395722 CXCL11O14625 94 aa17.43■□□□□ 0.38
PTPN20-206ENST00000395722 PPP1R11O60927 126 aaPredicted RBP17.43■□□□□ 0.38
PTPN20-206ENST00000395722 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
PTPN20-206ENST00000395722 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPN20-206ENST00000395722 HMGCS2P54868 508 aa17.43■□□□□ 0.38
PTPN20-206ENST00000395722 ZNF408Q9H9D4 720 aa17.43■□□□□ 0.38
PTPN20-206ENST00000395722 ATP6V1DQ9Y5K8 247 aa17.43■□□□□ 0.38
PTPN20-206ENST00000395722 KIF28PB7ZC32 967 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
PTPN20-206ENST00000395722 CDC37Q16543 378 aaPredicted RBP17.42■□□□□ 0.38
PTPN20-206ENST00000395722 QRICH1Q2TAL8 776 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 CST9Q5W186 159 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 RLFQ13129 1914 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
PTPN20-206ENST00000395722 ESYT2A0FGR8 921 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 PPP1R18Q6NYC8 613 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
PTPN20-206ENST00000395722 C2orf69Q8N8R5 385 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 DAGLBQ8NCG7 672 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 RANBP17Q9H2T7 1088 aaKnown RBP17.42■□□□□ 0.38
PTPN20-206ENST00000395722 RPAP3Q9H6T3 665 aaPredicted RBP17.42■□□□□ 0.38
PTPN20-206ENST00000395722 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
PTPN20-206ENST00000395722 MYH15Q9Y2K3 1946 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 IRF6O14896 467 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
PTPN20-206ENST00000395722 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTPN20-206ENST00000395722 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 BRAPQ7Z569 592 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
PTPN20-206ENST00000395722 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 SLF1Q9BQI6 1058 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
PTPN20-206ENST00000395722 TMOD4Q9NZQ9 345 aa17.41■□□□□ 0.38
PTPN20-206ENST00000395722 CALML3P27482 149 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 GJA5P36382 358 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
PTPN20-206ENST00000395722 OPTNQ96CV9 577 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 ZMYND12Q9H0C1 365 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 BTBD18B2RXH4 712 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 PRPF38AQ8NAV1 312 aaKnown RBP17.4■□□□□ 0.38
PTPN20-206ENST00000395722 PROCA1Q8NCQ7 364 aaPredicted RBP17.4■□□□□ 0.38
PTPN20-206ENST00000395722 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 SLC10A4Q96EP9 437 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 CHAMP1Q96JM3 812 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
PTPN20-206ENST00000395722 KRT2P35908 639 aa17.39■□□□□ 0.37
PTPN20-206ENST00000395722 NAPAP54920 295 aa17.39■□□□□ 0.37
PTPN20-206ENST00000395722 NLRP5P59047 1200 aa17.39■□□□□ 0.37
PTPN20-206ENST00000395722 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
PTPN20-206ENST00000395722 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
PTPN20-206ENST00000395722 TANGO6Q9C0B7 1094 aa17.39■□□□□ 0.37
PTPN20-206ENST00000395722 PCDHA4Q9UN74 947 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms