RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 A0A1W2PQD8 194 aa17.41■□□□□ 0.38
SCAF11-204ENST00000395454 ECE1P42892 770 aa17.41■□□□□ 0.38
SCAF11-204ENST00000395454 PPP4R3BQ5MIZ7 849 aa17.41■□□□□ 0.38
SCAF11-204ENST00000395454 KCNG4Q8TDN1 519 aa17.41■□□□□ 0.38
SCAF11-204ENST00000395454 AS3MTQ9HBK9 375 aa17.41■□□□□ 0.38
SCAF11-204ENST00000395454 ARHGEF10LQ9HCE6 1279 aa17.41■□□□□ 0.38
SCAF11-204ENST00000395454 TRIM75PA6NK02 468 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
SCAF11-204ENST00000395454 MMP1P03956 469 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 APLP1P51693 650 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 TRIM29Q14134 588 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 ACER1Q8TDN7 264 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 OPTNQ96CV9 577 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 FEZ1Q99689 392 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 CLSTN2Q9H4D0 955 aa17.4■□□□□ 0.38
SCAF11-204ENST00000395454 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 RAD21O60216 631 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 NOVP48745 357 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 SPP2Q13103 211 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
SCAF11-204ENST00000395454 SIAH1Q8IUQ4 282 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
SCAF11-204ENST00000395454 ZNF280CQ8ND82 737 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 TMEM47Q9BQJ4 181 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 NUP62CLQ9H1M0 184 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 DACT1Q9NYF0 836 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 NYAP2Q9P242 653 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 MTMR7Q9Y216 660 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 TLL2Q9Y6L7 1015 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
SCAF11-204ENST00000395454 PPATQ06203 517 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 PKN1Q16512 942 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 ADALQ6DHV7 355 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
SCAF11-204ENST00000395454 KAT14Q9H8E8 782 aa17.39■□□□□ 0.37
SCAF11-204ENST00000395454 PHIPQ8WWQ0 1821 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 CNTNAP5Q8WYK1 1306 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 IRF6O14896 467 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 MKRN3Q13064 507 aaKnown RBP17.38■□□□□ 0.37
SCAF11-204ENST00000395454 MTMR2Q13614 643 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 ANO1Q5XXA6 986 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 AFG3L2Q9Y4W6 797 aa17.38■□□□□ 0.37
SCAF11-204ENST00000395454 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 NR1I2O75469 434 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 TOP1P11387 765 aaKnown RBP17.37■□□□□ 0.37
SCAF11-204ENST00000395454 RGMBQ6NW40 437 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 PNMA1Q8ND90 353 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 BICD2Q8TD16 824 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 WDR18Q9BV38 432 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 CLIC4Q9Y696 253 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 MORC2Q9Y6X9 1032 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-204ENST00000395454 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
SCAF11-204ENST00000395454 CCDC173Q0VFZ6 552 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 SNW1Q13573 536 aaKnown RBP17.37■□□□□ 0.37
SCAF11-204ENST00000395454 SLC39A14Q15043 492 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-204ENST00000395454 NOSTRINQ8IVI9 506 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 MKL1Q969V6 931 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 PDLIM2Q96JY6 352 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 PCDHA7Q9UN72 937 aa17.37■□□□□ 0.37
SCAF11-204ENST00000395454 SPTLC2O15270 562 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 PLEKHA8P1O95397 391 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 FAM160A1Q05DH4 1040 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 PPIL2Q13356 520 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 PTPAQ15257 358 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 UVSSAQ2YD98 709 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 CTCFLQ8NI51 663 aaPredicted RBP17.36■□□□□ 0.37
SCAF11-204ENST00000395454 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.36■□□□□ 0.37
SCAF11-204ENST00000395454 TMX2Q9Y320 296 aa17.36■□□□□ 0.37
SCAF11-204ENST00000395454 PPP6R2O75170 966 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 GJA5P36382 358 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 ME1P48163 572 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 BACE1P56817 501 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 GRM1Q13255 1194 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 DGKZQ13574 1117 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCAF11-204ENST00000395454 AXDND1Q5T1B0 1012 aaPredicted RBP17.35■□□□□ 0.37
SCAF11-204ENST00000395454 DIS3L2Q8IYB7 885 aaKnown RBP17.35■□□□□ 0.37
SCAF11-204ENST00000395454 SPICE1Q8N0Z3 855 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 SHISA4Q96DD7 197 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 WNK4Q96J92 1243 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 GOLPH3LQ9H4A5 285 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 KIF5BP33176 963 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 HMGCS2P54868 508 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 STK38Q15208 465 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 CCAR1Q8IX12 1150 aaKnown RBP17.35■□□□□ 0.37
SCAF11-204ENST00000395454 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
SCAF11-204ENST00000395454 PHF20Q9BVI0 1012 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 TNMDQ9H2S6 317 aa17.35■□□□□ 0.37
SCAF11-204ENST00000395454 FAM237AA0A1B0GTK4 181 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 F5H6K3 240 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms