RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 KIFC2Q96AC6 838 aa13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 ZMYND8Q9ULU4 1186 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
HLA-DQA1-203ENST00000395363 RANBP6O60518 1105 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 SLC34A2O95436 690 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 FGAP02671 866 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 CYBAP13498 195 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 PDE4BQ07343 736 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 RAVER2Q9HCJ3 691 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 TOMM22Q9NS69 142 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 NEDD4P46934 1319 aa13.79□□□□□ -0.2
HLA-DQA1-203ENST00000395363 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 TTLL1O95922 423 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 IGHA2P01877 340 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 HOXC6P09630 235 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 SYN1P17600 705 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 SDSP20132 328 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 MCCP23508 829 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 STAT3P40763 770 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 MFSD14CQ5VZR4 134 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 NECAB2Q7Z6G3 386 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 MB21D1Q8N884 522 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 SHCBP1Q8NEM2 672 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 MMP19Q99542 508 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
HLA-DQA1-203ENST00000395363 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 EVI5O60447 810 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 MAML3Q96JK9 1138 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 HTATIP2Q9BUP3 242 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 MROH8Q9H579 483 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
HLA-DQA1-203ENST00000395363 FRMPD2Q68DX3 1309 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 FCER1AP12319 257 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 BMP3P12645 472 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 IRX5P78411 483 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 LRRC26Q2I0M4 334 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 GJC2Q5T442 439 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 TRMT44Q8IYL2 757 aaKnown RBP13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 MKL1Q969V6 931 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ANAPC4Q9UJX5 808 aa13.76□□□□□ -0.21
HLA-DQA1-203ENST00000395363 SLC3A2P08195 630 aaKnown RBP13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 SLC16A2P36021 539 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 IKQ13123 557 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ALX1Q15699 326 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 CCDC174Q6PII3 467 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 FGD4Q96M96 766 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 AGBL1Q96MI9 1066 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ZNF536O15090 1300 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 STRNO43815 780 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ORC4O43929 436 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 SLC25A27O95847 323 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 COL6A1P12109 1028 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 PTGS1P23219 599 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 AAMPQ13685 434 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 CCDC96Q2M329 555 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ZNF792Q3KQV3 632 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 OLFML2BQ68BL8 750 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 CPVLQ9H3G5 476 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ADCY6O43306 1168 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 SLC1A4P43007 532 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 KCTD2Q14681 263 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 RCSD1Q6JBY9 416 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ANKLE1Q8NAG6 615 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 PRPF38AQ8NAV1 312 aaKnown RBP13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 TMEM47Q9BQJ4 181 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 SENP6Q9GZR1 1112 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 GPCPD1Q9NPB8 672 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 FEM1BQ9UK73 627 aa13.73□□□□□ -0.21
HLA-DQA1-203ENST00000395363 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
HLA-DQA1-203ENST00000395363 ZBED4O75132 1171 aa13.72□□□□□ -0.21
HLA-DQA1-203ENST00000395363 PGK1P00558 417 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms