RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 HNRNPLLQ8WVV9 542 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 BICD1Q96G01 975 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 PNKPQ96T60 521 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 MAP2K7O14733 419 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 CEP104O60308 925 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 TIMM10P62072 90 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 DIXDC1Q155Q3 683 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 EHD4Q9H223 541 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 MROH5Q6ZUA9 1318 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 CARMIL3Q8ND23 1372 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 DIAPH2O60879 1101 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 NFIXQ14938 502 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 HIP1RO75146 1068 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 TSNAXIP1Q2TAA8 658 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 DPCR1Q3MIW9 517 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 TBC1D1Q86TI0 1168 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 GSPT2Q8IYD1 628 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 TTLL11Q8NHH1 800 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 RASSF10A6NK89 507 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 STX10O60499 249 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 POLR3DP05423 398 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 DDR1Q08345 913 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 MAP3K12Q12852 859 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 TTF1Q15361 905 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 GKAP1Q5VSY0 366 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 HGSO14964 777 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 MAP7D1Q3KQU3 841 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC92Q53HC0 331 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 ZC3H12AQ5D1E8 599 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
RAPGEF3-202ENST00000395358 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 PDHA1P08559 390 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 NCAPH2Q6IBW4 605 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 CTNNBL1Q8WYA6 563 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 MRPL12P52815 198 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 DYNC1I2Q13409 638 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 SIRT2Q8IXJ6 389 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 SAMD15Q9P1V8 674 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 TTF2Q9UNY4 1162 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 COL18A1P39060 1754 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 FERP16591 822 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 SPATA21Q7Z572 469 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 C2CD5Q86YS7 1000 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 FAM184BQ9ULE4 1060 aa12.59□□□□□ -0.39
RAPGEF3-202ENST00000395358 MYO1BO43795 1136 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 ATP1A3P13637 1013 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 NNTQ13423 1086 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 ME3Q16798 604 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 COG1Q8WTW3 980 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 LPIN2Q92539 896 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 VCX3BQ9H321 246 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 VCX3AQ9NNX9 186 aa12.58□□□□□ -0.39
RAPGEF3-202ENST00000395358 YEATS4O95619 227 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 SYKP43405 635 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 TCERG1LQ5VWI1 586 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 TOGARAM2Q6ZUX3 1019 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 EYA3Q99504 573 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 LUC7L2Q9Y383 392 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 TAF5LO75529 589 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 POLA2Q14181 598 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 LRRC24Q50LG9 513 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 RSRC2Q7L4I2 434 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 TEKT4Q8WW24 435 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 ALS2CR12Q96Q35 445 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 DBNDD2Q9BQY9 259 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 VCPKMTQ9H867 229 aa12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 RPAP1Q9BWH6 1393 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-202ENST00000395358 CIAO1O76071 339 aa12.57□□□□□ -0.4
RAPGEF3-202ENST00000395358 LARGE1O95461 756 aa12.57□□□□□ -0.4
RAPGEF3-202ENST00000395358 NLRP12P59046 1061 aa12.57□□□□□ -0.4
RAPGEF3-202ENST00000395358 PTPN12Q05209 780 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-202ENST00000395358 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
RAPGEF3-202ENST00000395358 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms