RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 AS3MTQ9HBK9 375 aa22.22■■□□□ 1.15
LMNB1-202ENST00000395354 SPDYE5A6NIY4 337 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 NASPP49321 788 aaPredicted RBP22.21■■□□□ 1.15
LMNB1-202ENST00000395354 PPATQ06203 517 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 GRM4Q14833 912 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 ACER1Q8TDN7 264 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 MKL1Q969V6 931 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 PGBD1Q96JS3 809 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 WDR18Q9BV38 432 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 SPP2Q13103 211 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 GNL2Q13823 731 aaKnown RBP22.21■■□□□ 1.15
LMNB1-202ENST00000395354 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 OPTNQ96CV9 577 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 OTUD5Q96G74 571 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 TMEM47Q9BQJ4 181 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 FOXP1Q9H334 677 aaPredicted RBP22.21■■□□□ 1.15
LMNB1-202ENST00000395354 AFG3L2Q9Y4W6 797 aa22.21■■□□□ 1.15
LMNB1-202ENST00000395354 CNTNAP5Q8WYK1 1306 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 A0A1W2PRG0 241 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 SYCE3A1L190 88 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 TOP1P11387 765 aaKnown RBP22.2■■□□□ 1.14
LMNB1-202ENST00000395354 ECE1P42892 770 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 PKN1Q16512 942 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 CMTR1Q8N1G2 835 aaKnown RBP22.2■■□□□ 1.14
LMNB1-202ENST00000395354 CCDC82Q8N4S0 544 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 KCNG4Q8TDN1 519 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 LZTS2Q9BRK4 669 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 CREBZFQ9NS37 354 aa22.2■■□□□ 1.14
LMNB1-202ENST00000395354 ZNF157P51786 506 aaPredicted RBP22.19■■□□□ 1.14
LMNB1-202ENST00000395354 RGMBQ6NW40 437 aa22.19■■□□□ 1.14
LMNB1-202ENST00000395354 SRBD1Q8N5C6 995 aaKnown RBP22.19■■□□□ 1.14
LMNB1-202ENST00000395354 LINC00301Q8NCQ3 95 aa22.19■■□□□ 1.14
LMNB1-202ENST00000395354 DDX19AQ9NUU7 478 aaKnown RBP22.19■■□□□ 1.14
LMNB1-202ENST00000395354 TMX2Q9Y320 296 aa22.19■■□□□ 1.14
LMNB1-202ENST00000395354 V9GY48 417 aaPredicted RBP22.19■■□□□ 1.14
LMNB1-202ENST00000395354 TRIM75PA6NK02 468 aa22.18■■□□□ 1.14
LMNB1-202ENST00000395354 USP17L10C9JJH3 530 aa22.18■■□□□ 1.14
LMNB1-202ENST00000395354 IRF6O14896 467 aa22.18■■□□□ 1.14
LMNB1-202ENST00000395354 XRCC6P12956 609 aaKnown RBP eCLIP22.18■■□□□ 1.14
LMNB1-202ENST00000395354 PPIL2Q13356 520 aa22.18■■□□□ 1.14
LMNB1-202ENST00000395354 LRRC47Q8N1G4 583 aaKnown RBP22.18■■□□□ 1.14
LMNB1-202ENST00000395354 SH2D4AQ9H788 454 aa22.18■■□□□ 1.14
LMNB1-202ENST00000395354 BACE1P56817 501 aa22.17■■□□□ 1.14
LMNB1-202ENST00000395354 CEBPZQ03701 1054 aaKnown RBP22.17■■□□□ 1.14
LMNB1-202ENST00000395354 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
LMNB1-202ENST00000395354 NOSTRINQ8IVI9 506 aa22.17■■□□□ 1.14
LMNB1-202ENST00000395354 WNK4Q96J92 1243 aa22.17■■□□□ 1.14
LMNB1-202ENST00000395354 HHIPL1Q96JK4 782 aa22.17■■□□□ 1.14
LMNB1-202ENST00000395354 FEZ1Q99689 392 aa22.17■■□□□ 1.14
LMNB1-202ENST00000395354 GJA5P36382 358 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 STK38Q15208 465 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 DIS3L2Q8IYB7 885 aaKnown RBP22.16■■□□□ 1.14
LMNB1-202ENST00000395354 BICD2Q8TD16 824 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 PHF20Q9BVI0 1012 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 FTOQ9C0B1 505 aaKnown RBP eCLIP22.16■■□□□ 1.14
LMNB1-202ENST00000395354 KIAA1683Q9H0B3 1180 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 SYNPO2Q9UMS6 1093 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 PHIPQ8WWQ0 1821 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 MYH4Q9Y623 1939 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 A0A1W2PQ27 194 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 A0A1W2PQ64 194 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 A0A1W2PQD8 194 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 C19orf81C9J6K1 198 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 CXCL11O14625 94 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 LIG1P18858 919 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 SMARCA1P28370 1054 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 MTMR2Q13614 643 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 ZYXQ15942 572 aaKnown RBP22.16■■□□□ 1.14
LMNB1-202ENST00000395354 SPRYD7Q5W111 196 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 FAM177A1Q8N128 213 aaPredicted RBP22.16■■□□□ 1.14
LMNB1-202ENST00000395354 MAD2L2Q9UI95 211 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 CLIC4Q9Y696 253 aa22.16■■□□□ 1.14
LMNB1-202ENST00000395354 MYH6P13533 1939 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 PALM3A6NDB9 673 aaPredicted RBP22.15■■□□□ 1.14
LMNB1-202ENST00000395354 F5H6K3 240 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 SPTLC2O15270 562 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 RAD21O60216 631 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 KLRC3Q07444 240 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 SLC39A14Q15043 492 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 PFKFB3Q16875 520 aaPredicted RBP22.15■■□□□ 1.14
LMNB1-202ENST00000395354 ADALQ6DHV7 355 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 CCDC102AQ96A19 550 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 KCNJ14Q9UNX9 436 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 KCNH4Q9UQ05 1017 aa22.15■■□□□ 1.14
LMNB1-202ENST00000395354 BTBD18B2RXH4 712 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 ZBTB48P10074 688 aaPredicted RBP22.14■■□□□ 1.13
LMNB1-202ENST00000395354 SCG2P13521 617 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 ME1P48163 572 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 USP14P54578 494 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 MKRN3Q13064 507 aaKnown RBP22.14■■□□□ 1.13
LMNB1-202ENST00000395354 SF3A1Q15459 793 aaKnown RBP22.14■■□□□ 1.13
LMNB1-202ENST00000395354 DEFB115Q30KQ5 88 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 RILPL1Q5EBL4 403 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 RASAL3Q86YV0 1011 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 TSPY26PQ9H489 355 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 VCPKMTQ9H867 229 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 BRMS1Q9HCU9 246 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 GOPCQ9HD26 462 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms