RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TSR3Q9UJK0 312 aaKnown RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 ZNF180Q9UJW8 692 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 SMC2O95347 1197 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 DNTTP04053 509 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 KRT1P04264 644 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CTCFP49711 727 aaPredicted RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 AP2B1P63010 937 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 SGCGQ13326 291 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 LBRQ14739 615 aaKnown RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 GRM3Q14832 879 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 PPA1Q15181 289 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 TSGA10IPQ3SY00 556 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CAVIN4Q5BKX8 364 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 KAZNQ674X7 775 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 LIN54Q6MZP7 749 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 LURAP1LQ8IV03 231 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CCDC144CPQ8IYA2 1237 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 NSUN6Q8TEA1 469 aaKnown RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 FBF1Q8TES7 1133 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 GPRASP2Q96D09 838 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CLMNQ96JQ2 1002 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 VCPKMTQ9H867 229 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 NPDC1Q9NQX5 325 aaPredicted RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 PAPOLBQ9NRJ5 636 aaKnown RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 TTLL13PA6NNM8 815 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 TISP43B9A030 160 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 B9A039 149 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 IRS4O14654 1257 aaPredicted RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 NEMFO60524 1076 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ABLIM3O94929 683 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 INTS11Q5TA45 600 aaKnown RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 CRTC1Q6UUV9 634 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CCDC116Q8IYX3 515 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 AADATQ8N5Z0 425 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 EFCAB3Q8N7B9 438 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 PPM1NQ8N819 430 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 C2orf69Q8N8R5 385 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 C7orf57Q8NEG2 295 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CCDC26Q8TAB7 109 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 PI4K2BQ8TCG2 481 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CEP295NLQ96MC4 621 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 IRX2Q9BZI1 471 aaPredicted RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 OSBPL3Q9H4L5 887 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ATG3Q9NT62 314 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ANKIB1Q9P2G1 1089 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 TACC3Q9Y6A5 838 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 FANCD2Q9BXW9 1451 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ALG1L2C9J202 215 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 GPR182O15218 404 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 STAM2O75886 525 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ASMTLO95671 621 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 MAGEA10P43363 369 aaPredicted RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 EHHADHQ08426 723 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 G3BP1Q13283 466 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC4-204ENST00000395198 TAF7Q15545 349 aaPredicted RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 ISM2Q6H9L7 571 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ENOSF1Q7L5Y1 443 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CEP57L1Q8IYX8 460 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ARL8AQ96BM9 186 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
HERC4-204ENST00000395198 TAOK3Q9H2K8 898 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 FAM184BQ9ULE4 1060 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ABCA5Q8WWZ7 1642 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 SLC12A8A0AV02 714 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 MASP2O00187 686 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 PMM2O15305 246 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 GUCA1CO95843 209 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 HSD17B2P37059 387 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 PTPN12Q05209 780 aaKnown RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 SF3B3Q15393 1217 aaKnown RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 PPP1R15BQ5SWA1 713 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 FASTKD5Q7L8L6 764 aaKnown RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 SLC41A1Q8IVJ1 513 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 ANKRD24Q8TF21 1146 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 KCTD13Q8WZ19 329 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 C8orf76Q96K31 380 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 TIGD1Q96MW7 591 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 RBCK1Q9BYM8 510 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 HPS4Q9NQG7 708 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 SSX2IPQ9Y2D8 614 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 HCN4Q9Y3Q4 1203 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 V9GY48 417 aaPredicted RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 SPAG9O60271 1321 aaKnown RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 CYP2D7A0A087X1C5 515 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 M0R3H8 397 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 EOMESO95936 686 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 KRT13P13646 458 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 KCNH2Q12809 1159 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 CBX2Q14781 532 aaPredicted RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 IQCB1Q15051 598 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 POSTNQ15063 836 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 CLPPQ16740 277 aaPredicted RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 ZNF362Q5T0B9 420 aaPredicted RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 CCDC122Q5T0U0 273 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 TRIM68Q6AZZ1 485 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 TMCO3Q6UWJ1 677 aa4.8□□□□□ -1.64
HERC4-204ENST00000395198 SYDE1Q6ZW31 735 aaPredicted RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 SPATS2Q86XZ4 545 aaKnown RBP4.8□□□□□ -1.64
HERC4-204ENST00000395198 COLGALT2Q8IYK4 626 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms