RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 IQCB1Q15051 598 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 DIS3L2Q8IYB7 885 aaKnown RBP13.43□□□□□ -0.26
SIN3A-202ENST00000394947 SYCE1Q8N0S2 351 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 CCDC138Q96M89 665 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 TTC4O95801 387 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 HIBADHP31937 336 aaKnown RBP13.43□□□□□ -0.26
SIN3A-202ENST00000394947 PHBP35232 272 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 TRIP13Q15645 432 aaPredicted RBP13.43□□□□□ -0.26
SIN3A-202ENST00000394947 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 HIPK4Q8NE63 616 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 HAUS8Q9BT25 410 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 CHMLP26374 656 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
SIN3A-202ENST00000394947 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
SIN3A-202ENST00000394947 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 HIP1RO75146 1068 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ZSCAN26Q16670 478 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 RPAINQ86UA6 219 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 SCYL3Q8IZE3 742 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 FLOT1O75955 427 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 TRIM14Q14142 442 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 LARGE2Q8N3Y3 721 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ANKRD13CQ8N6S4 541 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 EYA3Q99504 573 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 SUCLA2Q9P2R7 463 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 SEC31AO94979 1220 aaKnown RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 CCDC85BQ15834 202 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 PDCD2Q16342 344 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-202ENST00000394947 PPP2R5EQ16537 467 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 WDR48Q8TAF3 677 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 RIC8AQ9NPQ8 531 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 POLE2P56282 527 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 DAB2P98082 770 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 XAGE2Q96GT9 111 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 CYTH2Q99418 400 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 HAUS2Q9NVX0 235 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ENC1O14682 589 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ATF2P15336 505 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 OTUD6AQ7L8S5 288 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 NCAPG2Q86XI2 1143 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 LRRC8CQ8TDW0 803 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ZNF148Q9UQR1 794 aa13.42□□□□□ -0.26
SIN3A-202ENST00000394947 ALAS1P13196 640 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 PPM1KQ8N3J5 372 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 ZCWPW1Q9H0M4 648 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 RAB17Q9H0T7 212 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 DNAJC17Q9NVM6 304 aaKnown RBP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 EPRSP07814 1512 aaKnown RBP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 SART1O43290 800 aaKnown RBP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 NCF2P19878 526 aaPredicted RBP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 CCT5P48643 541 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 ARHGAP4P98171 946 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 TMED2Q15363 201 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 C8orf34Q49A92 452 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 LRCH2Q5VUJ6 765 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 SH2D4AQ9H788 454 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 GPAA1O43292 621 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 GANCQ8TET4 914 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 GAS7O60861 476 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 TOM1L1O75674 476 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 SLCO1A2P46721 670 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 KRT33BQ14525 404 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 PHLDB3Q6NSJ2 640 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 H3BRJ5 948 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 SCNN1DP51172 638 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 ASPHQ12797 758 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 CCNYQ8ND76 341 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.261e-6■■■■□ 23.9
SIN3A-202ENST00000394947 ANKRD2Q9GZV1 360 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
SIN3A-202ENST00000394947 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
SIN3A-202ENST00000394947 MTMR3Q13615 1198 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 P3H4Q92791 437 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 CAPS2Q9BXY5 557 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 ACTN1P12814 892 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 BFSP1Q12934 665 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 XPO4Q9C0E2 1151 aaKnown RBP13.4□□□□□ -0.26
SIN3A-202ENST00000394947 PANK4Q9NVE7 773 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 ORC6Q9Y5N6 252 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms