RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 BIN1O00499 593 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 FOXN1O15353 648 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 ADCY5O95622 1261 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 STX1AQ16623 288 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 CCDC148Q8NFR7 591 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 PTGER2P43116 358 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 PRELPP51888 382 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 PNOCQ13519 176 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 CCDC96Q2M329 555 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 NBPF9Q3BBW0 867 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 SPDYE2Q495Y8 402 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 ADGRF4Q8IZF3 695 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 PDILTQ8N807 584 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 COA7Q96BR5 231 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 ZMYND12Q9H0C1 365 aa20.49■□□□□ 0.87
CLDND1-204ENST00000394185 POLR2DO15514 142 aaKnown RBP20.48■□□□□ 0.87
CLDND1-204ENST00000394185 EGFRP00533 1210 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 GH2P01242 217 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 RASSF7Q02833 373 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 IL17AQ16552 155 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 INF2Q27J81 1249 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 ABCB5Q2M3G0 1257 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 DAGLBQ8NCG7 672 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 KANSL2Q9H9L4 492 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 JMJD4Q9H9V9 463 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 TMOD2Q9NZR1 351 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 A0A087X0B3 334 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 SMCO2A6NFE2 343 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 PPP1R11O60927 126 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-204ENST00000394185 ATP2C1P98194 919 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-204ENST00000394185 ICA1Q05084 483 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 DPCR1Q3MIW9 517 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 ISM2Q6H9L7 571 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
CLDND1-204ENST00000394185 AGBL3Q8NEM8 1001 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 NLGN2Q8NFZ4 835 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 TIGD1Q96MW7 591 aa20.48■□□□□ 0.87
CLDND1-204ENST00000394185 CCDC194A0A1B0GVG4 234 aa20.47■□□□□ 0.87
CLDND1-204ENST00000394185 VWA3AA6NCI4 1184 aa20.47■□□□□ 0.87
CLDND1-204ENST00000394185 CIAPIN1Q6FI81 312 aa20.47■□□□□ 0.87
CLDND1-204ENST00000394185 KRBA2Q6ZNG9 492 aa20.47■□□□□ 0.87
CLDND1-204ENST00000394185 JDP2Q8WYK2 163 aa20.47■□□□□ 0.87
CLDND1-204ENST00000394185 USP17L10C9JJH3 530 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 WNT10BO00744 389 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 TRAPPC10P48553 1259 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 IQCB1Q15051 598 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 TMEM179Q6ZVK1 233 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 CNNM3Q8NE01 707 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■■□□ 18.4
CLDND1-204ENST00000394185 RRAGDQ9NQL2 400 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-204ENST00000394185 NYAP2Q9P242 653 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-204ENST00000394185 GRAMD1CQ8IYS0 662 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 FAM151AQ8WW52 585 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 SYMPKQ92797 1274 aaKnown RBP20.46■□□□□ 0.87
CLDND1-204ENST00000394185 UPF1Q92900 1129 aaKnown RBP eCLIP20.46■□□□□ 0.87
CLDND1-204ENST00000394185 MKL1Q969V6 931 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 NUP88Q99567 741 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-204ENST00000394185 FAM13BQ9NYF5 915 aa20.46■□□□□ 0.87
CLDND1-204ENST00000394185 COL2A1P02458 1487 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-204ENST00000394185 GALNT17Q6IS24 598 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 ANO10Q9NW15 660 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 SERTAD1Q9UHV2 236 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 MORC2Q9Y6X9 1032 aaPredicted RBP20.45■□□□□ 0.86
CLDND1-204ENST00000394185 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 ZBED3Q96IU2 234 aaPredicted RBP20.45■□□□□ 0.86
CLDND1-204ENST00000394185 TMEM260Q9NX78 707 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 BIN2Q9UBW5 565 aaPredicted RBP20.45■□□□□ 0.86
CLDND1-204ENST00000394185 CD2APQ9Y5K6 639 aa20.45■□□□□ 0.86
CLDND1-204ENST00000394185 A0A1W2PRG0 241 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 SLC1A4P43007 532 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 GPATCH4Q5T3I0 446 aaKnown RBP20.44■□□□□ 0.86
CLDND1-204ENST00000394185 SLFN13Q68D06 897 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 DHX40Q8IX18 779 aaKnown RBP20.44■□□□□ 0.86
CLDND1-204ENST00000394185 MYOZ2Q9NPC6 264 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 BMP15O95972 392 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 PRR29P0C7W0 189 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-204ENST00000394185 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
CLDND1-204ENST00000394185 JAKMIP3Q5VZ66 844 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 MTMR14Q8NCE2 650 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-204ENST00000394185 FERMT2Q96AC1 680 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 TMEM60Q9H2L4 133 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 C6orf50Q9HD87 102 aa20.44■□□□□ 0.86
CLDND1-204ENST00000394185 F5H6K3 240 aa20.43■□□□□ 0.86
CLDND1-204ENST00000394185 ACTN4O43707 911 aaKnown RBP20.43■□□□□ 0.86
CLDND1-204ENST00000394185 KLRC3Q07444 240 aa20.43■□□□□ 0.86
CLDND1-204ENST00000394185 TUBE1Q9UJT0 475 aa20.43■□□□□ 0.86
CLDND1-204ENST00000394185 PNMA6FA0A0J9YX94 578 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 CDC25AP30304 524 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 ECE1P42892 770 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 HERC5Q9UII4 1024 aaKnown RBP20.42■□□□□ 0.86
CLDND1-204ENST00000394185 NDUFB10O96000 172 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 GNA11P29992 359 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms