RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 KLHL40Q2TBA0 621 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 SV2BQ7L1I2 683 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 PTF1AQ7RTS3 328 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 TCF12Q99081 682 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 DNAJB12Q9NXW2 375 aaKnown RBP6.75□□□□□ -1.33
NPM1-203ENST00000393820 TLR7Q9NYK1 1049 aaKnown RBP6.75□□□□□ -1.33
NPM1-203ENST00000393820 SIRPGQ9P1W8 387 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 SALL4Q9UJQ4 1053 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 KIF24Q5T7B8 1368 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 CD163L1Q9NR16 1453 aa6.75□□□□□ -1.33
NPM1-203ENST00000393820 U2SURPO15042 1029 aaKnown RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 GREM1O60565 184 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 ACPPP15309 386 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 DGKGP49619 791 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 NUCB2P80303 420 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 RSPO4Q2I0M5 234 aaPredicted RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 NME9Q86XW9 330 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 KCNB2Q92953 911 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 COG3Q96JB2 828 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 FAM208AQ9UK61 1670 aaKnown RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 COL3A1P02461 1466 aaPredicted RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 FYB1O15117 783 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 MAP3K6O95382 1288 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 PSAPP07602 524 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 CELA3AP09093 270 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 CPB1P15086 417 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 ADH7P40394 386 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 LIG3P49916 1009 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 FAM160A1Q05DH4 1040 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 RABEP1Q15276 862 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 MAP3K11Q16584 847 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 PTPROQ16827 1216 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 ANKRD45Q5TZF3 282 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 DTHD1Q6ZMT9 781 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 GAS2L3Q86XJ1 694 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 HNRNPLLQ8WVV9 542 aaKnown RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 TNFRSF25Q93038 417 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 RNPC3Q96LT9 517 aaKnown RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 TRIM55Q9BYV6 548 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 PDGFDQ9GZP0 370 aaPredicted RBP6.74□□□□□ -1.33
NPM1-203ENST00000393820 LIN7BQ9HAP6 207 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 SNTG2Q9NY99 539 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 NAGPAQ9UK23 515 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 TLR6Q9Y2C9 796 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 AKAP2Q9Y2D5 859 aa6.74□□□□□ -1.33
NPM1-203ENST00000393820 A0A1W2PP64 1363 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 GOLGB1Q14789 3259 aaKnown RBP6.73□□□□□ -1.33
NPM1-203ENST00000393820 VAMP4O75379 141 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 CDC45O75419 566 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 TRPA1O75762 1119 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 EPXP11678 715 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 CRKP46108 304 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 ZNF445P59923 1031 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 GNAI1P63096 354 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 PLAURQ03405 335 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 PCNX4Q63HM2 1172 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 C8orf86Q6ZUL3 223 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 ZSCAN30Q86W11 494 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 CCNJLQ8IV13 435 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 FLAD1Q8NFF5 587 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 MDFIQ99750 246 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 PDCL3Q9H2J4 239 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 AVENQ9NQS1 362 aaPredicted RBP6.73□□□□□ -1.33
NPM1-203ENST00000393820 PRKAG3Q9UGI9 489 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 PAPPAQ13219 1627 aa6.73□□□□□ -1.33
NPM1-203ENST00000393820 LTN1O94822 1766 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 KAT6BQ8WYB5 2073 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 QSER1Q2KHR3 1735 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 GRIN3BO60391 1043 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 OFD1O75665 1012 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 PF4P02776 101 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 AMPHP49418 695 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 NKAPLQ5M9Q1 402 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 ZCRB1Q8TBF4 217 aaKnown RBP6.72□□□□□ -1.33
NPM1-203ENST00000393820 TRPM4Q8TD43 1214 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 DEPDC7Q96QD5 511 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 ZKSCAN3Q9BRR0 538 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 API5Q9BZZ5 524 aaKnown RBP6.72□□□□□ -1.33
NPM1-203ENST00000393820 IFT57Q9NWB7 429 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 TFCP2L1Q9NZI6 479 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 SLC6A14Q9UN76 642 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 CHD4Q14839 1912 aa6.72□□□□□ -1.33
NPM1-203ENST00000393820 BTAF1O14981 1849 aa6.71□□□□□ -1.33
NPM1-203ENST00000393820 ELOA3CA0A087WX78 387 aaPredicted RBP6.71□□□□□ -1.34
NPM1-203ENST00000393820 ELOA3DA6NLF2 546 aaPredicted RBP6.71□□□□□ -1.34
NPM1-203ENST00000393820 ADARB2-AS1A8MUL3 147 aa6.71□□□□□ -1.34
NPM1-203ENST00000393820 ENC1O14682 589 aa6.71□□□□□ -1.34
NPM1-203ENST00000393820 RAB11FIP3O75154 756 aa6.71□□□□□ -1.34
NPM1-203ENST00000393820 KIF4AO95239 1232 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms