RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 MRPS27Q92552 414 aaKnown RBP9.91□□□□□ -0.82
TDP1-203ENST00000393454 DEFB129Q9H1M3 183 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 GOLPH3LQ9H4A5 285 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 JMJD4Q9H9V9 463 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 C6orf50Q9HD87 102 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 PGAP2Q9UHJ9 254 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 CCDC194A0A1B0GVG4 234 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 A0A1B0GVL5 298 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 A0A1W2PQ27 194 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 A0A1W2PQ64 194 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 A0A1W2PQD8 194 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 SMCO2A6NFE2 343 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 ADAMTS3O15072 1205 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 PPP6R2O75170 966 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 NDUFB10O96000 172 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 CAP2P40123 477 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 EPS15P42566 896 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 GALNT17Q6IS24 598 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 GMCL1P1Q8NEA9 526 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 TRPM4Q8TD43 1214 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 RASGRP4Q8TDF6 673 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 TEPSINQ96N21 525 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 NUP88Q99567 741 aaPredicted RBP9.9□□□□□ -0.82
TDP1-203ENST00000393454 TNMDQ9H2S6 317 aa9.9□□□□□ -0.82
TDP1-203ENST00000393454 PNMA6FA0A0J9YX94 578 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 A0A1W2PRG0 241 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 KINO60870 393 aaKnown RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 DDNO94850 711 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 BMP3P12645 472 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 GNA11P29992 359 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ECE1P42892 770 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 MRE11P49959 708 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 FAM160A1Q05DH4 1040 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ZNF174Q15697 407 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ACER1Q8TDN7 264 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 TNFRSF25Q93038 417 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 COA7Q96BR5 231 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 TSPY26PQ9H489 355 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 GRPEL1Q9HAV7 217 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 GOPCQ9HD26 462 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 TMEM232C9JQI7 657 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 hCG_1984214I3L0E3 225 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ASNSP08243 561 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ZYXQ15942 572 aaKnown RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 TTC38Q5R3I4 469 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 AXDND1Q5T1B0 1012 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 NBPF12Q5TAG4 269 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 APOBEC3FQ8IUX4 373 aaKnown RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 CKAP2LQ8IYA6 745 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 FAM177A1Q8N128 213 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 ZNF713Q8N859 430 aaPredicted RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 DAGLBQ8NCG7 672 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 CLIC6Q96NY7 704 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.89□□□□□ -0.83
TDP1-203ENST00000393454 PCDHA6Q9UN73 950 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 PCDHA8Q9Y5H6 950 aa9.89□□□□□ -0.83
TDP1-203ENST00000393454 ZBTB5O15062 677 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 CUTAO60888 179 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 CMA1P23946 247 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 NDUFA8P51970 172 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 MAP3K10Q02779 954 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 CCDC84Q86UT8 332 aaPredicted RBP9.88□□□□□ -0.83
TDP1-203ENST00000393454 SH2D4AQ9H788 454 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 GGA3Q9NZ52 723 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 TMX2Q9Y320 296 aa9.88□□□□□ -0.83
TDP1-203ENST00000393454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 PHF20L1A8MW92 1017 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 BMP15O95972 392 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 MCM7P33993 719 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 TRAPPC10P48553 1259 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 ADCY7P51828 1080 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 SNW1Q13573 536 aaKnown RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 GPR162Q16538 588 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 SYDE2Q5VT97 1194 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 DCAF15Q66K64 600 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 FEZ1Q99689 392 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 BIN2Q9UBW5 565 aaPredicted RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 SYNPO2Q9UMS6 1093 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 ATAD5Q96QE3 1844 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 WNT7AO00755 349 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 XRCC6P12956 609 aaKnown RBP eCLIP9.87□□□□□ -0.83
TDP1-203ENST00000393454 PFKFB1P16118 471 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 HIRAP54198 1017 aaPredicted RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 SNAP25P60880 206 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 CDC37Q16543 378 aaPredicted RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 INF2Q27J81 1249 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 QRICH1Q2TAL8 776 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 SPECC1Q5M775 1068 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms