RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TUBB4BP68371 445 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 H7C1D1 291 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 PNKPQ96T60 521 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 DISC1Q9NRI5 854 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 PCDHA4Q9UN74 947 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 MAPK8IP1Q9UQF2 711 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 PRDX5P30044 214 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 UBXN1Q04323 297 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 WWC2Q6AWC2 1192 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 ADSSL1Q8N142 457 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 GPKOWQ92917 476 aaPredicted RBP eCLIP21.23■□□□□ 0.99
CBX1-202ENST00000393408 WHAMMP3Q1A5X7 153 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 NAALADL2Q58DX5 795 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 SLF1Q9BQI6 1058 aa21.23■□□□□ 0.99
CBX1-202ENST00000393408 M0R2N6 131 aa21.22■□□□□ 0.99
CBX1-202ENST00000393408 TFRCP02786 760 aaKnown RBP21.22■□□□□ 0.99
CBX1-202ENST00000393408 PARP1P09874 1014 aaKnown RBP21.22■□□□□ 0.99
CBX1-202ENST00000393408 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
CBX1-202ENST00000393408 SLC10A5Q5PT55 438 aa21.22■□□□□ 0.99
CBX1-202ENST00000393408 BEND6Q5SZJ8 279 aaPredicted RBP21.22■□□□□ 0.99
CBX1-202ENST00000393408 KAT14Q9H8E8 782 aa21.22■□□□□ 0.99
CBX1-202ENST00000393408 CALCOCO1Q9P1Z2 691 aa21.22■□□□□ 0.99
CBX1-202ENST00000393408 THRAP3Q9Y2W1 955 aaKnown RBP21.22■□□□□ 0.99
CBX1-202ENST00000393408 ST5P78524 1137 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 TFCP2L1Q9NZI6 479 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 TRIM49BA6NDI0 452 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 TMED8Q6PL24 325 aaPredicted RBP21.21■□□□□ 0.99
CBX1-202ENST00000393408 RASGRP4Q8TDF6 673 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 CHP1Q99653 195 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 IL17RBQ9NRM6 502 aa21.21■□□□□ 0.99
CBX1-202ENST00000393408 REXO2Q9Y3B8 237 aaKnown RBP21.21■□□□□ 0.99
CBX1-202ENST00000393408 KCNB1Q14721 858 aa21.2■□□□□ 0.99
CBX1-202ENST00000393408 TYW1BQ6NUM6 668 aa21.2■□□□□ 0.99
CBX1-202ENST00000393408 DGKHQ86XP1 1220 aa21.2■□□□□ 0.99
CBX1-202ENST00000393408 STAG2Q8N3U4 1231 aa21.2■□□□□ 0.99
CBX1-202ENST00000393408 EPN1Q9Y6I3 576 aaPredicted RBP21.2■□□□□ 0.99
CBX1-202ENST00000393408 LGALS16A8MUM7 142 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 H3BQF6 201 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 NDUFA10O95299 355 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 USP17L8P0C7I0 530 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 RPS8P62241 208 aaKnown RBP21.2■□□□□ 0.98
CBX1-202ENST00000393408 AMPD2Q01433 879 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 DTHD1Q6ZMT9 781 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 MB21D1Q8N884 522 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 PNMA1Q8ND90 353 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 ANKS1AQ92625 1134 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 SMARCC1Q92922 1105 aaPredicted RBP21.2■□□□□ 0.98
CBX1-202ENST00000393408 MCM9Q9NXL9 1143 aa21.2■□□□□ 0.98
CBX1-202ENST00000393408 TTC26A0AVF1 554 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 CTAGE15A4D2H0 777 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 KLRC4O43908 158 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 CTAGE8P0CG41 777 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 PMS1P54277 932 aaKnown RBP21.19■□□□□ 0.98
CBX1-202ENST00000393408 PIP4K2BP78356 416 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 TFAP4Q01664 338 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 GRM4Q14833 912 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 CTAGE6Q86UF2 777 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 CTAGE4Q8IX94 777 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 ZNF507Q8TCN5 953 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 TMEM60Q9H2L4 133 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 CCDC194A0A1B0GVG4 234 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 A0A1W2PQC6 194 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 PP2D1A8MPX8 630 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 EEF1GP26641 437 aaKnown RBP21.19■□□□□ 0.98
CBX1-202ENST00000393408 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 OR8K1Q8NGG5 319 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 DNAJC7Q99615 494 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 MYH1P12882 1939 aa21.19■□□□□ 0.98
CBX1-202ENST00000393408 GTF2E1P29083 439 aaPredicted RBP21.18■□□□□ 0.98
CBX1-202ENST00000393408 HDXQ7Z353 690 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 TXLNBQ8N3L3 684 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 DAGLBQ8NCG7 672 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 LINC00116Q8NCU8 138 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 NEK11Q8NG66 645 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 THAP9Q9H5L6 903 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 PCDHA6Q9UN73 950 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 PCDHA8Q9Y5H6 950 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 ZNF831Q5JPB2 1677 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 ERLIN1O75477 346 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 MYL1P05976 194 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 SLC35G1Q2M3R5 365 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 SLC4A8Q2Y0W8 1093 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 C12orf60Q5U649 245 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 TBC1D9BQ66K14 1250 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 MSL3Q8N5Y2 521 aaKnown RBP21.18■□□□□ 0.98
CBX1-202ENST00000393408 CCSER1Q9C0I3 900 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 ANKRD2Q9GZV1 360 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 KBTBD4Q9NVX7 518 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 MKRN1Q9UHC7 482 aaKnown RBP21.18■□□□□ 0.98
CBX1-202ENST00000393408 MAD2L2Q9UI95 211 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 MYO6Q9UM54 1294 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 L1RE1Q9UN81 338 aa21.18■□□□□ 0.98
CBX1-202ENST00000393408 RHOBTB3O94955 611 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 HNRNPH2P55795 449 aaKnown RBP21.17■□□□□ 0.98
CBX1-202ENST00000393408 ABCB6Q9NP58 842 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 KCNQ2O43526 872 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 RHOXF2BP0C7M4 288 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 NT5C2P49902 561 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 GNAQP50148 359 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms