RNA–Protein interactions for RNA: ENST00000393028.5

GIPC1-202, Transcript of GIPC PDZ domain containing family member 1, humanhuman

TSL 3 BASIC

Gene GIPC1, Length 1,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-202ENST00000393028 USP17L22D6RA61 530 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 USP17L17D6RBQ6 530 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 USP17L19D6RCP7 530 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 USP17L20D6RJB6 530 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 CYTH3O43739 400 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 DHX16O60231 1041 aaKnown RBP32.77■■■□□ 2.84
GIPC1-202ENST00000393028 USP17L24Q0WX57 530 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 FUT2Q10981 343 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 SYDE2Q5VT97 1194 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 CATSPERGQ6ZRH7 1159 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 PIBF1Q8WXW3 757 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 KIFC2Q96AC6 838 aa32.77■■■□□ 2.84
GIPC1-202ENST00000393028 JAK2O60674 1132 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 CUL4AQ13619 759 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 BTNL9Q6UXG8 535 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 PTPN18Q99952 460 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 SLF1Q9BQI6 1058 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 VAT1LQ9HCJ6 419 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 FOXD4L1Q9NU39 408 aa32.76■■■□□ 2.84
GIPC1-202ENST00000393028 A0A0G2JMZ2 1700 aa32.76■■■□□ 2.83
GIPC1-202ENST00000393028 hCG_1642624A0A1W2PR95 340 aa32.75■■■□□ 2.83
GIPC1-202ENST00000393028 ADGRF4Q8IZF3 695 aa32.75■■■□□ 2.83
GIPC1-202ENST00000393028 FAM43AQ8N2R8 423 aa32.75■■■□□ 2.83
GIPC1-202ENST00000393028 NSUN7Q8NE18 718 aaKnown RBP32.75■■■□□ 2.83
GIPC1-202ENST00000393028 LZTS2Q9BRK4 669 aa32.75■■■□□ 2.83
GIPC1-202ENST00000393028 PRR12Q9ULL5 1215 aa32.75■■■□□ 2.83
GIPC1-202ENST00000393028 TESPA1A2RU30 521 aaPredicted RBP32.74■■■□□ 2.83
GIPC1-202ENST00000393028 HSPA6P17066 643 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 IFNAR1P17181 557 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 SLC4A3P48751 1232 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 SNAP25P60880 206 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 KIF23Q02241 960 aaPredicted RBP32.74■■■□□ 2.83
GIPC1-202ENST00000393028 CPLX2Q6PUV4 134 aaKnown RBP32.74■■■□□ 2.83
GIPC1-202ENST00000393028 FAM160B2Q86V87 743 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 CHURC1Q8WUH1 139 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 SPZ1Q9BXG8 430 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 SMCHD1A6NHR9 2005 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 PTPDC1A2A3K4 754 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 HOXA7P31268 230 aaPredicted RBP32.74■■■□□ 2.83
GIPC1-202ENST00000393028 NOGQ13253 232 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 ANKRD23Q86SG2 305 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 SLC26A6Q9BXS9 759 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 PPP1R9AQ9ULJ8 1098 aa32.74■■■□□ 2.83
GIPC1-202ENST00000393028 IGF2BP3O00425 579 aaKnown RBP eCLIP32.73■■■□□ 2.83
GIPC1-202ENST00000393028 PLA2G6O60733 806 aa32.73■■■□□ 2.83
GIPC1-202ENST00000393028 IRX3P78415 501 aaPredicted RBP32.73■■■□□ 2.83
GIPC1-202ENST00000393028 SPRYD3Q8NCJ5 442 aa32.73■■■□□ 2.83
GIPC1-202ENST00000393028 ATG4CQ96DT6 458 aa32.73■■■□□ 2.83
GIPC1-202ENST00000393028 ASCC2Q9H1I8 757 aaPredicted RBP32.73■■■□□ 2.83
GIPC1-202ENST00000393028 RIOX1Q9H6W3 641 aa32.73■■■□□ 2.83
GIPC1-202ENST00000393028 JMJD4Q9H9V9 463 aa32.73■■■□□ 2.83
GIPC1-202ENST00000393028 THSD7BQ9C0I4 1608 aa32.72■■■□□ 2.83
GIPC1-202ENST00000393028 WDR33Q9C0J8 1336 aaKnown RBP32.72■■■□□ 2.83
GIPC1-202ENST00000393028 PDHXO00330 501 aa32.72■■■□□ 2.83
GIPC1-202ENST00000393028 VEGFBP49765 207 aa32.72■■■□□ 2.83
GIPC1-202ENST00000393028 PABPC4Q13310 644 aaKnown RBP eCLIP32.72■■■□□ 2.832e-7■■□□□ 12
GIPC1-202ENST00000393028 HOMER1Q86YM7 354 aa32.72■■■□□ 2.83
GIPC1-202ENST00000393028 DDX11Q96FC9 970 aa32.72■■■□□ 2.83
GIPC1-202ENST00000393028 SPDYE16A6NNV3 312 aaPredicted RBP32.71■■■□□ 2.83
GIPC1-202ENST00000393028 CDKL5O76039 1030 aa32.71■■■□□ 2.83
GIPC1-202ENST00000393028 PIGSQ96S52 555 aa32.71■■■□□ 2.83
GIPC1-202ENST00000393028 DSG3P32926 999 aa32.7■■■□□ 2.83
GIPC1-202ENST00000393028 SREBF2Q12772 1141 aa32.7■■■□□ 2.83
GIPC1-202ENST00000393028 COG2Q14746 738 aa32.7■■■□□ 2.83
GIPC1-202ENST00000393028 PRPF38AQ8NAV1 312 aaKnown RBP32.7■■■□□ 2.83
GIPC1-202ENST00000393028 FMNL1O95466 1100 aaPredicted RBP32.69■■■□□ 2.82
GIPC1-202ENST00000393028 SSRP1Q08945 709 aaKnown RBP32.69■■■□□ 2.82
GIPC1-202ENST00000393028 P2RX7Q99572 595 aaKnown RBP32.69■■■□□ 2.82
GIPC1-202ENST00000393028 LLPHQ9BRT6 129 aaKnown RBP32.69■■■□□ 2.82
GIPC1-202ENST00000393028 V9GY48 417 aaPredicted RBP32.69■■■□□ 2.82
GIPC1-202ENST00000393028 HSP90AA1P07900 732 aaKnown RBP32.68■■■□□ 2.82
GIPC1-202ENST00000393028 CYP2C8P10632 490 aa32.68■■■□□ 2.82
GIPC1-202ENST00000393028 OSBPP22059 807 aa32.68■■■□□ 2.82
GIPC1-202ENST00000393028 SMARCA1P28370 1054 aa32.68■■■□□ 2.82
GIPC1-202ENST00000393028 CDC37Q16543 378 aaPredicted RBP32.68■■■□□ 2.82
GIPC1-202ENST00000393028 IFNL1Q8IU54 200 aa32.68■■■□□ 2.82
GIPC1-202ENST00000393028 SMARCC2Q8TAQ2 1214 aa32.68■■■□□ 2.82
GIPC1-202ENST00000393028 SLC45A1Q9Y2W3 748 aa32.68■■■□□ 2.82
GIPC1-202ENST00000393028 TRIM22Q8IYM9 498 aa32.67■■■□□ 2.82
GIPC1-202ENST00000393028 RRP36Q96EU6 259 aaKnown RBP32.67■■■□□ 2.82
GIPC1-202ENST00000393028 RNF26Q9BY78 433 aaPredicted RBP32.67■■■□□ 2.82
GIPC1-202ENST00000393028 HERVK_113P62684 666 aa32.67■■■□□ 2.82
GIPC1-202ENST00000393028 CCDC174Q6PII3 467 aa32.67■■■□□ 2.82
GIPC1-202ENST00000393028 MTMR8Q96EF0 704 aa32.67■■■□□ 2.82
GIPC1-202ENST00000393028 RANBP17Q9H2T7 1088 aaKnown RBP32.67■■■□□ 2.82
GIPC1-202ENST00000393028 ORC3Q9UBD5 711 aaPredicted RBP32.67■■■□□ 2.82
GIPC1-202ENST00000393028 PNMA3Q9UL41 463 aa32.67■■■□□ 2.82
GIPC1-202ENST00000393028 ZSCAN21Q9Y5A6 473 aaPredicted RBP32.67■■■□□ 2.82
GIPC1-202ENST00000393028 MYPNQ86TC9 1320 aa32.66■■■□□ 2.82
GIPC1-202ENST00000393028 STK36Q9NRP7 1315 aa32.66■■■□□ 2.82
GIPC1-202ENST00000393028 PRPF3O43395 683 aaKnown RBP32.66■■■□□ 2.82
GIPC1-202ENST00000393028 FDPSP14324 419 aaKnown RBP32.66■■■□□ 2.82
GIPC1-202ENST00000393028 TAL1P17542 331 aaPredicted RBP32.66■■■□□ 2.82
GIPC1-202ENST00000393028 INHBEP58166 350 aa32.66■■■□□ 2.82
GIPC1-202ENST00000393028 QRICH1Q2TAL8 776 aa32.66■■■□□ 2.82
GIPC1-202ENST00000393028 SMC3Q9UQE7 1217 aa32.66■■■□□ 2.82
GIPC1-202ENST00000393028 VWA5AO00534 786 aa32.65■■■□□ 2.82
GIPC1-202ENST00000393028 PEX10O60683 326 aa32.65■■■□□ 2.82
GIPC1-202ENST00000393028 AKAP17AQ02040 695 aaKnown RBP32.65■■■□□ 2.82
GIPC1-202ENST00000393028 POTEEQ6S8J3 1075 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms