RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TBC1D8O95759 1140 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 UBE3CQ15386 1083 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.46□□□□□ -0.09
LCA5-202ENST00000392959 VTI1AQ96AJ9 217 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 ERVV-2B6SEH9 535 aa14.46□□□□□ -0.1
LCA5-202ENST00000392959 PPP6R2O75170 966 aa14.46□□□□□ -0.1
LCA5-202ENST00000392959 SLC35F6Q8N357 371 aa14.46□□□□□ -0.1
LCA5-202ENST00000392959 STK10O94804 968 aaKnown RBP14.45□□□□□ -0.1
LCA5-202ENST00000392959 MAP2K2P36507 400 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 SEPT6Q14141 434 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 NSMFQ6X4W1 530 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 C11orf57Q6ZUT1 292 aaPredicted RBP14.45□□□□□ -0.1
LCA5-202ENST00000392959 IWS1Q96ST2 819 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 KLHL14Q9P2G3 628 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 PLXNC1O60486 1568 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 KLRF2D3W0D1 207 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 IFNB1P01574 187 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 LONP1P36776 959 aaKnown RBP14.45□□□□□ -0.1
LCA5-202ENST00000392959 POLR2FP61218 127 aaKnown RBP14.45□□□□□ -0.1
LCA5-202ENST00000392959 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 GALNT17Q6IS24 598 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 LIG3P49916 1009 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 FAM26FQ5R3K3 315 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 CCDC24Q8N4L8 307 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 P3H4Q92791 437 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 EEF2KMTQ96G04 330 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 VCXQ9H320 206 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 SLC39A2Q9NP94 309 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 KDM5DQ9BY66 1539 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 MED23Q9ULK4 1368 aa14.45□□□□□ -0.1
LCA5-202ENST00000392959 DAPK3O43293 454 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 CYP2J2P51589 502 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 APBA1Q02410 837 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 GAS7O60861 476 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 PCCAP05165 728 aaPredicted RBP14.44□□□□□ -0.1
LCA5-202ENST00000392959 RNF10Q8N5U6 811 aaKnown RBP14.44□□□□□ -0.1
LCA5-202ENST00000392959 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
LCA5-202ENST00000392959 MYOM2P54296 1465 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 CCDC89Q8N998 374 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 MIPOL1Q8TD10 442 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 CARMIL3Q8ND23 1372 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 TROVE2P10155 538 aaKnown RBP eCLIP14.44□□□□□ -0.1
LCA5-202ENST00000392959 TNNI1P19237 187 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 TCP10Q12799 353 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 PTPROQ16827 1216 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 CCT6BQ92526 530 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 TUBGCP2Q9BSJ2 902 aa14.44□□□□□ -0.1
LCA5-202ENST00000392959 METTL14Q9HCE5 456 aaKnown RBP14.44□□□□□ -0.1
LCA5-202ENST00000392959 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 PHKG2P15735 406 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 GYG1P46976 350 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 CCDC170Q8IYT3 715 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 RPUSD2Q8IZ73 545 aaKnown RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 STK38LQ9Y2H1 464 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 UBAP1LF5GYI3 381 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 DDAH1O94760 285 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 BCAMP50895 628 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 GUCY2DQ02846 1103 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 PSMD6Q15008 389 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 DPP8Q6V1X1 898 aaPredicted RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 PHLDB2Q86SQ0 1253 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 LINC00301Q8NCQ3 95 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 GABPB2Q8TAK5 448 aaPredicted RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 GPKOWQ92917 476 aaPredicted RBP eCLIP14.43□□□□□ -0.1
LCA5-202ENST00000392959 TACO1Q9BSH4 297 aaKnown RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 FOXP1Q9H334 677 aaPredicted RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 PSTPIP2Q9H939 334 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 TLR7Q9NYK1 1049 aaKnown RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 FAM170AA1A519 330 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 CASC4Q6P4E1 433 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 ZNF589Q86UQ0 364 aaPredicted RBP14.43□□□□□ -0.1
LCA5-202ENST00000392959 CTAGE3PQ8IX95 158 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 GPR108Q9NPR9 543 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 VPS41P49754 854 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 ADAM9Q13443 819 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 MICAL1Q8TDZ2 1067 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 RNF34Q969K3 372 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 HINFPQ9BQA5 517 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 PANK4Q9NVE7 773 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 KCNG1Q9UIX4 513 aa14.43□□□□□ -0.1
LCA5-202ENST00000392959 HIP1RO75146 1068 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 EHHADHQ08426 723 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 PPP2R5DQ14738 602 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 TBC1D31Q96DN5 1066 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 RIC8AQ9NPQ8 531 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 A0A087WWV3 80 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 VGLL3A8MV65 326 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 ENC1O14682 589 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 SEPT14Q6ZU15 432 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 CDAN1Q8IWY9 1227 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 RNF26Q9BY78 433 aaPredicted RBP14.42□□□□□ -0.1
LCA5-202ENST00000392959 GINS2Q9Y248 185 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 PHLPP2Q6ZVD8 1323 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 NOP56O00567 594 aaKnown RBP14.42□□□□□ -0.1
LCA5-202ENST00000392959 CRCPO75575 148 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 SEC31AO94979 1220 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms