RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 RREB1Q92766 1687 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 BAG3O95817 575 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 PLCD1P51178 756 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 DDR1Q08345 913 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 CEP112Q8N8E3 955 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 CDC25AP30304 524 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 PICALMQ13492 652 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 RAD9BQ6WBX8 426 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 CD209Q9NNX6 404 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 ATP8A2Q9NTI2 1148 aa12.23□□□□□ -0.45
BRF1-204ENST00000392557 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 PTPREP23469 700 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
BRF1-204ENST00000392557 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 SRGAP1Q7Z6B7 1085 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
BRF1-204ENST00000392557 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
BRF1-204ENST00000392557 CHD4Q14839 1912 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 APBA3O96018 575 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 GTF2IP78347 998 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 HDXQ7Z353 690 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
BRF1-204ENST00000392557 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 PLIN2Q99541 437 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 TMEM51Q9NW97 253 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 ARPP21Q9UBL0 812 aaPredicted RBP12.22□□□□□ -0.45
BRF1-204ENST00000392557 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 FBXO2Q9UK22 296 aaPredicted RBP12.22□□□□□ -0.45
BRF1-204ENST00000392557 ENC1O14682 589 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 BTDP43251 543 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
BRF1-204ENST00000392557 DOCK2Q92608 1830 aa12.21□□□□□ -0.45
BRF1-204ENST00000392557 MCM7P33993 719 aa12.21□□□□□ -0.45
BRF1-204ENST00000392557 TEX11Q8IYF3 940 aa12.21□□□□□ -0.45
BRF1-204ENST00000392557 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
BRF1-204ENST00000392557 ANKRD65E5RJM6 399 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 MYO1BO43795 1136 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 RAD21O60216 631 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 IPO7O95373 1038 aaKnown RBP12.21□□□□□ -0.46
BRF1-204ENST00000392557 ADRA2BP18089 450 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 KRT9P35527 623 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 UBXN1Q04323 297 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 MORC3Q14149 939 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 DOK7Q18PE1 504 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 SPATA1Q5VX52 437 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.462e-8■■□□□ 12.3
BRF1-204ENST00000392557 CTAGE1Q96RT6 745 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 ABCB6Q9NP58 842 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 POLLQ9UGP5 575 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 RSPH14Q9UHP6 348 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 CDC23Q9UJX2 597 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 LAMB2P55268 1798 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 SCN7AQ01118 1682 aa12.21□□□□□ -0.46
BRF1-204ENST00000392557 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
BRF1-204ENST00000392557 CNGA4Q8IV77 575 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 PLEKHA4Q9H4M7 779 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 FAN1Q9Y2M0 1017 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 PCNTO95613 3336 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 FAM170AA1A519 330 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 CCDC151A5D8V7 595 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
BRF1-204ENST00000392557 NLRP5P59047 1200 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 GSTO1P78417 241 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 TROAPQ12815 778 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 KIAA1328Q86T90 577 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
BRF1-204ENST00000392557 MXD3Q9BW11 206 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 FUT8Q9BYC5 575 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 CPVLQ9H3G5 476 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 FAM53CQ9NYF3 392 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 LDHCP07864 332 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
BRF1-204ENST00000392557 ERCC3P19447 782 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 KRT2P35908 639 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 NR1I3Q14994 352 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
BRF1-204ENST00000392557 ACBD3Q9H3P7 528 aa12.2□□□□□ -0.46
BRF1-204ENST00000392557 SRPRBQ9Y5M8 271 aaKnown RBP12.2□□□□□ -0.46
BRF1-204ENST00000392557 H3BQF6 201 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 ZMYND10O75800 440 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 FXR1P51114 621 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRF1-204ENST00000392557 BRD3Q15059 726 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 RASGRP2Q7LDG7 609 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 RNF26Q9BY78 433 aaPredicted RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 FOXP1Q9H334 677 aaPredicted RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 TRIM66O15016 1216 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 RGL2O15211 777 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms