RNA–Protein interactions for RNA: ENST00000390502.1

TRAJ35-201, Transcript of T cell receptor alpha joining 35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRAJ35, Length 59 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ35-201ENST00000390502 VPS37DQ86XT2 251 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 KCNG4Q8TDN1 519 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 VTI1AQ96AJ9 217 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 C12orf42Q96LP6 360 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 TINF2Q9BSI4 451 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 C17orf80Q9BSJ5 609 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 COL4A3Q01955 1670 aa6.25□□□□□ -1.41
TRAJ35-201ENST00000390502 PI4KAP2A4QPH2 592 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L15C9J2P7 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L13C9JLJ4 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L11C9JVI0 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L18D6R9N7 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L22D6RA61 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L17D6RBQ6 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L19D6RCP7 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L20D6RJB6 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 RBAK-RBAKDNI3L0D1 243 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 C6orf222P0C671 652 aaPredicted RBP6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 ERCC3P19447 782 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 ICAM3P32942 547 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 DEFB103AP81534 67 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L24Q0WX57 530 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 KSR2Q6VAB6 950 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 ABRAQ8N0Z2 381 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 PI4KAP1Q8N8J0 262 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 PCSK9Q8NBP7 692 aaKnown RBP6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 SHCBP1Q8NEM2 672 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 FBXO22Q8NEZ5 403 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 CYP2W1Q8TAV3 490 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 PUS3Q9BZE2 481 aaKnown RBP6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 UPF3AQ9H1J1 476 aaKnown RBP6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 NSUN3Q9H649 340 aaKnown RBP6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 CNNM1Q9NRU3 951 aa6.24□□□□□ -1.41
TRAJ35-201ENST00000390502 HELZ2Q9BYK8 2649 aaKnown RBP6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 DUSP11O75319 330 aaKnown RBP6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 DDX58O95786 925 aaKnown RBP6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 NEFMP07197 916 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 RIPK4P57078 832 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 GJA9P57773 515 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 WDR5P61964 334 aaKnown RBP6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 HYAL1Q12794 435 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 ANGPT1Q15389 498 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 PTPROQ16827 1216 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 ASTLQ6HA08 431 aaPredicted RBP6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 RUBCNQ92622 972 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 MSLNLQ96KJ4 702 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 SPATC1LQ9H0A9 340 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 SEMA4AQ9H3S1 761 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 DNAJC18Q9H819 358 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 SLC5A4Q9NY91 659 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 CTNNA3Q9UI47 895 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 CD207Q9UJ71 328 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 CHMP3Q9Y3E7 222 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 R4GN57 208 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 FANCMQ8IYD8 2048 aa6.23□□□□□ -1.41
TRAJ35-201ENST00000390502 LINC01565O15544 149 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 BAIAP3O94812 1187 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 GJB5O95377 273 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 EYA4O95677 639 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 SNAI1O95863 264 aaPredicted RBP6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 PGK2P07205 417 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 ASNSP08243 561 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 CYP2C9P11712 490 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 VCAM1P19320 739 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 PPP2R1AP30153 589 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 GTF2F1P35269 517 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 RHBDL3P58872 404 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 NKX3-2P78367 333 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 ITGA7Q13683 1181 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 ZNF792Q3KQV3 632 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 CAVIN4Q5BKX8 364 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 GNASQ5JWF2 1037 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 LRSAM1Q6UWE0 723 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 LMBR1LQ6UX01 489 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 CXCL17Q6UXB2 119 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 WDR66Q8TBY9 1149 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 RAD9AQ99638 391 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 HAUS7Q99871 368 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 FAM184BQ9ULE4 1060 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 ZBTB21Q9ULJ3 1066 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 KIF16BQ96L93 1317 aa6.22□□□□□ -1.41
TRAJ35-201ENST00000390502 H3BNC9 293 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 TAF4O00268 1085 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 NCK2O43639 380 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 NPM3O75607 178 aaKnown RBP6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 GDF11O95390 407 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 PROS1P07225 676 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 SDHBP21912 280 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 RFC2P35250 354 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 BEX3Q00994 111 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 NEXNQ0ZGT2 675 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 GPNMBQ14956 572 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 ZYXQ15942 572 aaKnown RBP6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 TCTN1Q2MV58 587 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 PPM1JQ5JR12 505 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 CWF19L1Q69YN2 538 aaKnown RBP6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 CCDC105Q8IYK2 499 aa6.21□□□□□ -1.42
TRAJ35-201ENST00000390502 VGLL2Q8N8G2 317 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms