RNA–Protein interactions for RNA: ENST00000390360.3

TRBV6-4-201, Transcript of T cell receptor beta variable 6-4, humanhuman

APPRIS P1 BASIC

Gene TRBV6-4, Length 365 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4-201ENST00000390360 PRC1O43663 620 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 ERCC3P19447 782 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 HSPA4P34932 840 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 OAZ1P54368 228 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 ZNF543Q08ER8 600 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 IRF5Q13568 498 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 SEC23AQ15436 765 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 SLC9C1Q4G0N8 1177 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 CHST3Q7LGC8 479 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 NCAPG2Q86XI2 1143 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 TMTC2Q8N394 836 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 SLC38A10Q9HBR0 1119 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 ZNF214Q9UL59 606 aaPredicted RBP11.61□□□□□ -0.55
TRBV6-4-201ENST00000390360 FRMPD2Q68DX3 1309 aaPredicted RBP11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 STRNO43815 780 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 RGS2P41220 211 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 ANTXR2P58335 489 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 ASPRV1Q53RT3 343 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 SYDE2Q5VT97 1194 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 SNRNP48Q6IEG0 339 aaKnown RBP11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 BTNL9Q6UXG8 535 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 CPXCR1Q8N123 301 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 REPS2Q8NFH8 660 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 IGDCC4Q8TDY8 1250 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 KCNB2Q92953 911 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 GJD2Q9UKL4 321 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 PRR12Q9ULL5 1215 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 GABRQQ9UN88 632 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
TRBV6-4-201ENST00000390360 RLFQ13129 1914 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 ADCY3O60266 1144 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 FCER1AP12319 257 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 XRCC5P13010 732 aaKnown RBP11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 PTPREP23469 700 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 PSMA5P28066 241 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 GRK4P32298 578 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 SLC16A2P36021 539 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 NFXL1Q6ZNB6 911 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 DHX32Q7L7V1 743 aaKnown RBP11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 RASGRP2Q7LDG7 609 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 ABRAQ8N0Z2 381 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 ARMC5Q96C12 935 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 USP26Q9BXU7 913 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 RAVER2Q9HCJ3 691 aaKnown RBP11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 SLC5A4Q9NY91 659 aa11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 BIN2Q9UBW5 565 aaPredicted RBP11.59□□□□□ -0.55
TRBV6-4-201ENST00000390360 A0A0G2JMZ2 1700 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 CCDC85CA6NKD9 419 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 GOLGA8HP0CJ92 632 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 LIFRP42702 1097 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 UBXN2AP68543 259 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 GRB14Q14449 540 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 KCTD2Q14681 263 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 TKFCQ3LXA3 575 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 MORN1Q5T089 497 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 SH3TC2Q8TF17 1288 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 MMP19Q99542 508 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 APBA2Q99767 749 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 RANBP17Q9H2T7 1088 aaKnown RBP11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 FBXO40Q9UH90 709 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 SNX14Q9Y5W7 946 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 ZSWIM8A7E2V4 1837 aa11.58□□□□□ -0.56
TRBV6-4-201ENST00000390360 MGAMO43451 1857 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 DHX16O60231 1041 aaKnown RBP11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 DDAH1O94760 285 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 ICAM1P05362 532 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 CALM1P0DP23 149 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 CALM2P0DP24 149 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 CALM3P0DP25 149 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 CYP2B6P20813 491 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 ADORA2AP29274 412 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 KIF5BP33176 963 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 FGD1P98174 961 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 CCDC174Q6PII3 467 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 BLOC1S2Q6QNY1 142 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 CHST13Q8NET6 341 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 USP6NLQ92738 828 aa11.57□□□□□ -0.56
TRBV6-4-201ENST00000390360 ZNF333Q96JL9 665 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms