RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
CCDC149-202ENST00000389609 ATP8A2Q9NTI2 1148 aa12.82□□□□□ -0.36
CCDC149-202ENST00000389609 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 COL4A1P02462 1669 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 AFMP43652 599 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 BCAMP50895 628 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC149-202ENST00000389609 AMPD2Q01433 879 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 PTGDRQ13258 359 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
CCDC149-202ENST00000389609 STIM1Q13586 685 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 MTF1Q14872 753 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 MAP9Q49MG5 647 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 COBLL1Q53SF7 1204 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
CCDC149-202ENST00000389609 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
CCDC149-202ENST00000389609 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 TARSL2A2RTX5 802 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 PRPHP41219 470 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 ARHGAP25P42331 645 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 GNAQP50148 359 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 KRT83P78385 493 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CDK17Q00537 523 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 SF3B2Q13435 895 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 FIGNQ5HY92 759 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 LEKR1Q6ZMV7 388 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 FAM71BQ8TC56 605 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CTNND2Q9UQB3 1225 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 V9GY48 417 aaPredicted RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 ANO9A1A5B4 782 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 LGALS16A8MUM7 142 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 EIF3CLB5ME19 914 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CKAP4Q07065 602 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 KCNJ12Q14500 433 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 MEA1Q16626 185 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CAVIN4Q5BKX8 364 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 KLHL10Q6JEL2 608 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 SUGP1Q8IWZ8 645 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 SLC35F6Q8N357 371 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CCDC148Q8NFR7 591 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 OR8K1Q8NGG5 319 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 DRC1Q96MC2 740 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 CCSER1Q9C0I3 900 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 EPC1Q9H2F5 836 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 LZTFL1Q9NQ48 299 aa12.8□□□□□ -0.36
CCDC149-202ENST00000389609 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
CCDC149-202ENST00000389609 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 RPN1P04843 607 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 ERVK-24P63145 666 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 ITPK1Q13572 414 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 ADSSL1Q8N142 457 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 NELFBQ8WX92 580 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 AK8Q96MA6 479 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 MYO6Q9UM54 1294 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 CAPN11Q9UMQ6 739 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 EPN1Q9Y6I3 576 aaPredicted RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 WTIPA6NIX2 430 aaPredicted RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 RHOBTB3O94955 611 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 NDUFA10O95299 355 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 KRT9P35527 623 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 DNM2P50570 870 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 STX17P56962 302 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 CORO7P57737 925 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 NLRP5P59047 1200 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 EARS2Q5JPH6 523 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 PAPD7Q5XG87 772 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 FOXR2Q6PJQ5 311 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 DGKHQ86XP1 1220 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 SDR42E1Q8WUS8 393 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 PPM1EQ8WY54 764 aa12.79□□□□□ -0.36
CCDC149-202ENST00000389609 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 ZNHIT6Q9NWK9 470 aaKnown RBP12.79□□□□□ -0.36
CCDC149-202ENST00000389609 PLEKHA8P1O95397 391 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 CPP00450 1065 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 ITIH3Q06033 890 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
CCDC149-202ENST00000389609 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 FAM114A1Q8IWE2 563 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 C4orf32Q8N8J7 132 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
CCDC149-202ENST00000389609 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-202ENST00000389609 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms