RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 KCTD1Q719H9 257 aa20.61■□□□□ 0.89
CD9-202ENST00000382515 ZNF654Q8IZM8 581 aa20.61■□□□□ 0.89
CD9-202ENST00000382515 CTCFLQ8NI51 663 aaPredicted RBP20.61■□□□□ 0.89
CD9-202ENST00000382515 SLC38A10Q9HBR0 1119 aa20.61■□□□□ 0.89
CD9-202ENST00000382515 FBXO28Q9NVF7 368 aa20.61■□□□□ 0.89
CD9-202ENST00000382515 ISY1Q9ULR0 285 aaKnown RBP20.61■□□□□ 0.89
CD9-202ENST00000382515 SLC25A27O95847 323 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 HOXD10P28358 340 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 MAPK4P31152 587 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 LACTBP83111 547 aaPredicted RBP20.6■□□□□ 0.89
CD9-202ENST00000382515 GRM4Q14833 912 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 Q6ZUG5 572 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 CCAR1Q8IX12 1150 aaKnown RBP20.6■□□□□ 0.89
CD9-202ENST00000382515 KIFC2Q96AC6 838 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 ATG4CQ96DT6 458 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
CD9-202ENST00000382515 CCDC196A0A1B0GTZ2 297 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 PRMT2P55345 433 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 TRAF1Q13077 416 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 SYDE2Q5VT97 1194 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 FANCBQ8NB91 859 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 SHCBP1Q8NEM2 672 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 LRRC2Q9BYS8 371 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 SPATC1LQ9H0A9 340 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 GPCPD1Q9NPB8 672 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 PDRG1Q9NUG6 133 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 TSKSQ9UJT2 592 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 LOC285556D6RIA3 1793 aa20.59■□□□□ 0.89
CD9-202ENST00000382515 KLRF2D3W0D1 207 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 STAT3P40763 770 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 FCGRTP55899 365 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 APOA5Q6Q788 366 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 NUP133Q8WUM0 1156 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 PAGR1Q9BTK6 254 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 TEX13BQ9BXU2 312 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 MROH8Q9H579 483 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 TXNRD2Q9NNW7 524 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
CD9-202ENST00000382515 MAD2L2Q9UI95 211 aa20.58■□□□□ 0.89
CD9-202ENST00000382515 PTPRFP10586 1907 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 ZBTB43O43298 467 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 STRNO43815 780 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 CNMDO75829 334 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 COL9A3Q14050 684 aaPredicted RBP20.57■□□□□ 0.88
CD9-202ENST00000382515 TMEM132BQ14DG7 1078 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 PKN2Q16513 984 aaKnown RBP20.57■□□□□ 0.88
CD9-202ENST00000382515 Q3C1V9 767 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 TKFCQ3LXA3 575 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 POTEEQ6S8J3 1075 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 RIOX2Q8IUF8 465 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 REPS2Q8NFH8 660 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 BRF1Q92994 677 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 ZNF274Q96GC6 653 aaPredicted RBP20.57■□□□□ 0.88
CD9-202ENST00000382515 MAF1Q9H063 256 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 GPHNQ9NQX3 736 aaPredicted RBP20.57■□□□□ 0.88
CD9-202ENST00000382515 BTBD7Q9P203 1132 aa20.57■□□□□ 0.88
CD9-202ENST00000382515 FRMPD2Q68DX3 1309 aaPredicted RBP20.56■□□□□ 0.88
CD9-202ENST00000382515 CPA1P15085 419 aa20.56■□□□□ 0.88
CD9-202ENST00000382515 PSMC4P43686 418 aa20.56■□□□□ 0.88
CD9-202ENST00000382515 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
CD9-202ENST00000382515 COA7Q96BR5 231 aa20.56■□□□□ 0.88
CD9-202ENST00000382515 TCEANC2Q96MN5 208 aa20.56■□□□□ 0.88
CD9-202ENST00000382515 UPF3BQ9BZI7 483 aaKnown RBP20.56■□□□□ 0.88
CD9-202ENST00000382515 RANBP17Q9H2T7 1088 aaKnown RBP20.56■□□□□ 0.88
CD9-202ENST00000382515 EFCC1Q9HA90 598 aa20.56■□□□□ 0.88
CD9-202ENST00000382515 ZNF214Q9UL59 606 aaPredicted RBP20.56■□□□□ 0.88
CD9-202ENST00000382515 KLF18A0A0U1RQI7 1052 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 FMNL1O95466 1100 aaPredicted RBP20.55■□□□□ 0.88
CD9-202ENST00000382515 GOLGA8HP0CJ92 632 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 SLC16A2P36021 539 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 NEK4P51957 841 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 SAMD1Q6SPF0 538 aaPredicted RBP20.55■□□□□ 0.88
CD9-202ENST00000382515 CHMP4CQ96CF2 233 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 TBC1D32Q96NH3 1257 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 RIOX1Q9H6W3 641 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 FBXO40Q9UH90 709 aa20.55■□□□□ 0.88
CD9-202ENST00000382515 PLS1Q14651 629 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 ADGRF4Q8IZF3 695 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 ABRAQ8N0Z2 381 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 STAG2Q8N3U4 1231 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 CHST13Q8NET6 341 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 SPZ1Q9BXG8 430 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 MOV10L1Q9BXT6 1211 aaKnown RBP20.54■□□□□ 0.88
CD9-202ENST00000382515 UBA5Q9GZZ9 404 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 BRPF3Q9ULD4 1205 aa20.54■□□□□ 0.88
CD9-202ENST00000382515 TNPO2O14787 897 aaKnown RBP20.53■□□□□ 0.88
CD9-202ENST00000382515 ICAM1P05362 532 aa20.53■□□□□ 0.88
CD9-202ENST00000382515 TOB2Q14106 344 aaPredicted RBP20.53■□□□□ 0.88
CD9-202ENST00000382515 RABEP1Q15276 862 aa20.53■□□□□ 0.88
CD9-202ENST00000382515 PLEKHH3Q7Z736 793 aa20.53■□□□□ 0.88
CD9-202ENST00000382515 CTU1Q7Z7A3 348 aaKnown RBP20.53■□□□□ 0.88
CD9-202ENST00000382515 CD99L2Q8TCZ2 262 aa20.53■□□□□ 0.88
CD9-202ENST00000382515 MTMR8Q96EF0 704 aa20.53■□□□□ 0.88
CD9-202ENST00000382515 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
CD9-202ENST00000382515 IVNS1ABPQ9Y6Y0 642 aa20.53■□□□□ 0.88
CD9-202ENST00000382515 METAP2P50579 478 aaKnown RBP eCLIP20.52■□□□□ 0.88
CD9-202ENST00000382515 APOBRQ0VD83 1088 aa20.52■□□□□ 0.88
CD9-202ENST00000382515 RTN1Q16799 776 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms