RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 ZBTB9Q96C00 473 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 EPSTI1Q96J88 318 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 USP27XA6NNY8 438 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 CALML3P27482 149 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 MCM7P33993 719 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 RBM5P52756 815 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLCN4-201ENST00000380829 PTGDRQ13258 359 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 ZFPM1Q8IX07 1006 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 LRRC47Q8N1G4 583 aaKnown RBP16.22■□□□□ 0.19
CLCN4-201ENST00000380829 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 PCDHA4Q9UN74 947 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
CLCN4-201ENST00000380829 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 SARM1Q6SZW1 724 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 MTMR4Q9NYA4 1195 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 A0A087X0B3 334 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 VWA3AA6NCI4 1184 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 STXBP3O00186 592 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 TCP10Q12799 353 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 STRIP1Q5VSL9 837 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 CLIP2Q9UDT6 1046 aa16.21■□□□□ 0.19
CLCN4-201ENST00000380829 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.18
CLCN4-201ENST00000380829 MDM2Q00987 491 aaPredicted RBP16.2■□□□□ 0.18
CLCN4-201ENST00000380829 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
CLCN4-201ENST00000380829 C7orf43Q8WVR3 580 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
CLCN4-201ENST00000380829 BPIFA3Q9BQP9 254 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 UBA5Q9GZZ9 404 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 ZNF446Q9NWS9 450 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 BARHL2Q9NY43 387 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 BMP15O95972 392 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 SHMT1P34896 483 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 NOVP48745 357 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
CLCN4-201ENST00000380829 POSTNQ15063 836 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.2■□□□□ 0.18
CLCN4-201ENST00000380829 FERMT2Q96AC1 680 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 DHX58Q96C10 678 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 ZDHHC15Q96MV8 337 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 PLIN4Q96Q06 1357 aa16.2■□□□□ 0.18
CLCN4-201ENST00000380829 ACTN4O43707 911 aaKnown RBP16.19■□□□□ 0.18
CLCN4-201ENST00000380829 C21orf2O43822 256 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 TRAPPC10P48553 1259 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 HNRNPH2P55795 449 aaKnown RBP16.19■□□□□ 0.18
CLCN4-201ENST00000380829 CCDC144BQ3MJ40 725 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 CCDC148Q8NFR7 591 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 FAM53CQ9NYF3 392 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 M0R2N6 131 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 PDHBP11177 359 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 HOOK1Q9UJC3 728 aaKnown RBP16.19■□□□□ 0.18
CLCN4-201ENST00000380829 PCDHA6Q9UN73 950 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 PCDHA8Q9Y5H6 950 aa16.19■□□□□ 0.18
CLCN4-201ENST00000380829 CCDC194A0A1B0GVG4 234 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 MPHOSPH10O00566 681 aaKnown RBP16.18■□□□□ 0.18
CLCN4-201ENST00000380829 BMP6P22004 513 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 NAPAP54920 295 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 NCAPHQ15003 741 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 PIGSQ96S52 555 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 MYH8P13535 1937 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 RRP36Q96EU6 259 aaKnown RBP16.18■□□□□ 0.18
CLCN4-201ENST00000380829 MRFAP1L1Q96HT8 127 aa16.18■□□□□ 0.18
CLCN4-201ENST00000380829 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 IL17AQ16552 155 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 INF2Q27J81 1249 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 ELOA2Q8IYF1 753 aaPredicted RBP16.17■□□□□ 0.18
CLCN4-201ENST00000380829 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
CLCN4-201ENST00000380829 DNAJC18Q9H819 358 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 SEC63Q9UGP8 760 aaKnown RBP16.17■□□□□ 0.18
CLCN4-201ENST00000380829 FEZ2Q9UHY8 353 aaPredicted RBP16.17■□□□□ 0.18
CLCN4-201ENST00000380829 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
CLCN4-201ENST00000380829 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 TTLL1O95922 423 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 CDC25BP30305 580 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
CLCN4-201ENST00000380829 YDJCA8MPS7 323 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 LMOD1P29536 600 aaPredicted RBP16.16■□□□□ 0.18
CLCN4-201ENST00000380829 CYP2C19P33261 490 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 AFMP43652 599 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
CLCN4-201ENST00000380829 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms